bump version

getAndroid.ps1: Silently continue if it cant remove the tmp folder

.gitattributes

@@ -1,6 +1,27 @@
-#
+* text=auto
-# https://help.github.com/articles/dealing-with-line-endings/
+* text eol=lf
-#
-# These are explicitly windows files and should use crlf
-*.bat           text eol=crlf
 
+# Windows forced line-endings
+/.idea/* text eol=crlf
+*.bat    text eol=crlf
+*.ps1    text eol=crlf
+
+# Gradle wrapper
+*.jar binary
+
+# Images
+*.webp binary
+*.png binary
+*.jpg binary
+*.jpeg binary
+*.gif binary
+*.ico binary
+*.gz binary
+*.zip binary
+*.7z binary
+*.ttf binary
+*.eot binary
+*.woff binary
+*.pyc binary
+*.swp binary
+*.pdf binary

.github/ISSUE_TEMPLATE/bug_report.md

@@ -0,0 +1,44 @@
+---
+name: "🐞 Bug report"
+title: "[Bug] <short description>"
+about: "Report a bug"
+labels: "bug"
+---
+
+**PLEASE READ THIS**
+
+I acknowledge that:
+
+- I have updated to the latest version of the app.
+- I have tried the troubleshooting guide described in `README.md`
+- If this is a request for adding/changing an extension it should be brought up to Tachiyomi: https://github.com/tachiyomiorg/tachiyomi-extensions/issues/new/choose
+- If this is an issue with some extension not working properly, It does work inside Tachiyomi as intended.
+- I have searched the existing issues and this is a new ticket **NOT** a duplicate or related to another open issue
+- I will fill out the title and the information in this template
+
+Note that the issue will be automatically closed if you do not fill out the title or requested information.
+
+**DELETE THIS SECTION IF YOU HAVE READ AND ACKNOWLEDGED IT**
+
+---
+
+## Device information
+- Tachidesk version: (Example: v0.2.3-r255-win32)
+- Server Operating System: (Example: Ubuntu 20.04)
+- Server Desktop Environment: N/A or (Example: Gnome 40)
+- Server JVM version: bundled with win32 or (Example: Java 8 Update 281 or OpenJDK 8u281)
+- Client Operating System: <usually the same as above Server Operating System>
+- Client Web Browser: (Example: Google Chrome 89.0.4389.82) 
+
+## Steps to reproduce
+1. First Step
+2. Second Step
+
+### Expected behavior
+Describe what should have happened. Remove this line after you are done.
+
+### Actual behavior
+Describe what happens instead. Remove this line after you are done.
+
+## Other details
+Describe additional details If necessary. Remove this line after you are done.

.github/ISSUE_TEMPLATE/config.yml

@@ -0,0 +1 @@
+blank_issues_enabled: false

.github/ISSUE_TEMPLATE/feature_request.md

@@ -0,0 +1,29 @@
+---
+name: "🌟 Feature request"
+title: "[Feature Request] <short description>"
+about: "Suggest a feature to improve the project"
+labels: "enhancement"
+---
+
+**PLEASE READ THIS**
+
+I acknowledge that:
+
+- I have updated to the latest version of the app.
+- I have tried the troubleshooting guide described in `README.md`
+- If this is a request for adding/changing an extension it should be brought up to Tachiyomi: https://github.com/tachiyomiorg/tachiyomi-extensions/issues/new/choose
+- If this is an issue with some extension not working properly, It does work in Tachiyomi application as intended.
+- I have searched the existing issues and this is a new ticket **NOT** a duplicate or related to another open issue
+- I will fill out the title and the information in this template
+
+Note that the issue will be automatically closed if you do not fill out the title or requested information.
+
+**DELETE THIS SECTION IF YOU HAVE READ AND ACKNOWLEDGED IT**
+
+---
+
+## What feature should be added to Tachidesk?
+Explain What the feature is and how it should work in detail. Remove this line after you are done.
+
+##  Why/Project's Benefit/Existing Problem
+Explain why this should be added. Remove this line after you are done.

.github/scripts/commit-repo.sh

@@ -1,10 +1,17 @@
 #!/bin/bash
 
-cp ../master/repo/* .
+git lfs install
-new_build=$(ls | tail -1)
+#git lfs track "*.zip"
-echo "New build file name: $new_build"
 
-cp -f $new_build Tachidesk-latest.jar
+cp ../master/repo/* .
+new_jar_build=$(ls *.jar| tail -1)
+echo "last jar build file name: $new_jar_build"
+
+new_win32_build=$(ls *.zip| tail -1)
+echo "last win32 build file name: $new_win32_build"
+
+cp -f $new_jar_build Tachidesk-latest.jar
+cp -f $new_win32_build Tachidesk-latest-win32.zip
 
 git config --global user.email "github-actions[bot]@users.noreply.github.com"
 git config --global user.name "github-actions[bot]"

.github/scripts/create-repo.sh

@@ -1,13 +1,20 @@
 #!/bin/bash
 
 # Get last commit message
-last_commit_log=$(git log -1 --pretty=format:"%s")
+#last_commit_log=$(git log -1 --pretty=format:"%s")
-echo "last commit log: $last_commit_log"
+#echo "last commit log: $last_commit_log"
+#
+#filter_count=$(echo "$last_commit_log" | grep -e '\[RELEASE CI\]' -e '\[CI RELEASE\]' | wc -c)
+#echo "count is: $filter_count"
 
-filter_count=$(echo "$last_commit_log" | grep -c '\[RELEASE CI\]' )
+mkdir -p repo/
-echo "count is: $filter_count"
+cp server/build/Tachidesk-*.jar repo/
+cp server/build/Tachidesk-*.zip repo/
 
-if [ "$filter_count" -gt 0 ]; then
+ls repo
-  mkdir -p repo/
+pwd
-  cp server/build/Tachidesk-*.jar repo/
+
-fi
+#if [ "$filter_count" -gt 0 ]; then
+#  cp server/build/Tachidesk-*.jar repo/
+#  cp server/build/Tachidesk-*.zip repo/
+#fi

.github/workflows/build.yml

@@ -48,37 +48,24 @@ jobs:
           mkdir -p ~/.gradle
           cp .github/runner-files/ci-gradle.properties ~/.gradle/gradle.properties
 
-      - name: Download and process android.jar
+      - name: Download android.jar
-        if: github.event_name == 'push' && github.repository == 'AriaMoradi/Tachidesk'
         run: |
           cd master
-          ./scripts/getAndroid.sh
+          curl https://raw.githubusercontent.com/AriaMoradi/Tachidesk/android-jar/android.jar -o AndroidCompat/lib/android.jar
 
-      - name: Build the Jar
+      - name: Cache node_modules
+        uses: actions/cache@v2
+        with:
+          path: |
+            **/react/node_modules
+          key: ${{ runner.os }}-${{ hashFiles('**/react/yarn.lock') }}
+
+      - name: Build Jar and launch4j
         uses: eskatos/gradle-command-action@v1
         with:
           build-root-directory: master
           wrapper-directory: master
-          arguments: :server:shadowJar --stacktrace
+          arguments: :server:windowsPackage --stacktrace
           wrapper-cache-enabled: true
           dependencies-cache-enabled: true
-          configuration-cache-enabled: true
+          configuration-cache-enabled: true
-
-      - name: Create repo artifacts
-        if: github.event_name == 'push' && github.repository == 'AriaMoradi/Tachidesk'
-        run: |
-          cd master
-          ./.github/scripts/create-repo.sh
-
-      - name: Checkout repo branch
-        if: github.event_name == 'push' && github.repository == 'AriaMoradi/Tachidesk'
-        uses: actions/checkout@v2
-        with:
-          ref: repo
-          path: repo
-
-      - name: Deploy repo
-        if: github.event_name == 'push' && github.repository == 'AriaMoradi/Tachidesk'
-        run: |
-          cd repo
-          ../master/.github/scripts/commit-repo.sh

.github/workflows/issue_closer.yml

@@ -0,0 +1,37 @@
+name: Issue closer
+
+on:
+  issues:
+    types: [opened, edited, reopened]
+
+jobs:
+  autoclose:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Autoclose issues
+        uses: arkon/issue-closer-action@v3.0
+        with:
+          repo-token: ${{ github.token }}
+          rules: |
+            [
+              {
+                "type": "title",
+                "regex": ".*<short description>*",
+                "message": "You did not fill out the description in the title"
+              },
+              {
+                "type": "body",
+                "regex": ".*DELETE THIS SECTION IF YOU HAVE READ AND ACKNOWLEDGED IT.*",
+                "message": "The acknowledgment section was not removed"
+              },
+              {
+                "type": "body",
+                "regex": "(Tachidesk version|Server Operating System|Server Desktop Environment|Server JVM version|Client Operating System|Client Web Browser):.*(\\(Example:|<usually).*",
+                "message": "The requested information was not filled out"
+              },
+              {
+                "type": "body",
+                "regex": ".*Remove this line after you are done.*",
+                "message": "The lines requesting to be removed were not removed."
+              }
+            ]

.github/workflows/publish.yml

@@ -0,0 +1,115 @@
+name: Publish
+
+on:
+  push:
+    tags:
+      - 'v*'
+
+jobs:
+  check_wrapper:
+    name: Validate Gradle Wrapper
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Clone repo
+        uses: actions/checkout@v2
+
+      - name: Validate Gradle Wrapper
+        uses: gradle/wrapper-validation-action@v1
+
+  build:
+    name: Build FatJar
+    needs: check_wrapper
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Cancel previous runs
+        uses: styfle/cancel-workflow-action@0.5.0
+        with:
+          access_token: ${{ github.token }}
+
+      - name: Checkout master branch
+        uses: actions/checkout@v2
+        with:
+          ref: master
+          path: master
+          fetch-depth: 0
+
+      - name: Set up JDK 1.8
+        uses: actions/setup-java@v1
+        with:
+          java-version: 1.8
+
+      - name: Copy CI gradle.properties
+        run: |
+          cd master
+          mkdir -p ~/.gradle
+          cp .github/runner-files/ci-gradle.properties ~/.gradle/gradle.properties
+
+      - name: Download android.jar
+        run: |
+          cd master
+          curl https://raw.githubusercontent.com/AriaMoradi/Tachidesk/android-jar/android.jar -o AndroidCompat/lib/android.jar
+
+      - name: Cache node_modules
+        uses: actions/cache@v2
+        with:
+          path: |
+            **/react/node_modules
+          key: ${{ runner.os }}-${{ hashFiles('**/yarn.lock') }}
+
+      - name: Build Jar and launch4j
+        uses: eskatos/gradle-command-action@v1
+        with:
+          build-root-directory: master
+          wrapper-directory: master
+          arguments: :server:windowsPackage --stacktrace
+          wrapper-cache-enabled: true
+          dependencies-cache-enabled: true
+          configuration-cache-enabled: true
+
+
+      - name: Create repo artifacts
+        run: |
+          cd master
+          ./.github/scripts/create-repo.sh
+
+      - name: Upload Release
+        uses: xresloader/upload-to-github-release@master
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        with:
+          file: "master/repo/*"
+          tags: true
+          draft: true
+          verbose: true
+
+#      - name: Create Release
+#        id: create_release
+#        uses: actions/create-release@v1
+#        env:
+#          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+#        with:
+#          tag_name: ${{ github.ref }}
+#          release_name: Release ${{ github.ref }}
+#          body: |
+#                  Release body
+#          draft: false
+#          prerelease: true
+#
+#      - name: Get the Ref
+#        id: get-ref
+#        uses: ankitvgupta/ref-to-tag-action@master
+#        with:
+#          ref: ${{ github.ref }}
+#          head_ref: ${{ github.head_ref }}
+#
+#      - name: Get the tag
+#        run: echo "The tag was ${{ steps.get-ref.outputs.tag }}"
+#
+#      - name: Upload Release
+#        uses: AButler/upload-release-assets@v2.0
+#        with:
+#          files: 'master/repo/*'
+#          repo-token: ${{ secrets.GITHUB_TOKEN }}
+#          release-tag: ${{ steps.get-ref.outputs.tag }}

AndroidCompat/Config/build.gradle

@@ -1,4 +1,4 @@
 dependencies {
-    // Config API
+    // Config API, moved to the global build.gradle
 //    implementation("com.typesafe:config:1.4.0")
 }

AndroidCompat/Config/src/main/java/xyz/nulldev/ts/config/ConfigManager.kt

@@ -1,57 +1,65 @@
 package xyz.nulldev.ts.config
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 import com.typesafe.config.Config
 import com.typesafe.config.ConfigFactory
 import com.typesafe.config.ConfigRenderOptions
 import mu.KotlinLogging
+import net.harawata.appdirs.AppDirsFactory
 import java.io.File
 
 /**
  * Manages app config.
  */
 open class ConfigManager {
-    private val generatedModules
+    private val dataRoot by lazy { AppDirsFactory.getInstance().getUserDataDir("Tachidesk", null, null)!! }
-            = mutableMapOf<Class<out ConfigModule>, ConfigModule>()
+
+    private val generatedModules = mutableMapOf<Class<out ConfigModule>, ConfigModule>()
     val config by lazy { loadConfigs() }
 
     //Public read-only view of modules
     val loadedModules: Map<Class<out ConfigModule>, ConfigModule>
         get() = generatedModules
 
-    open val configFolder: String
+    open val appConfigFile: String = "$dataRoot/server.conf"
-        get() = System.getProperty("compat-configdirs") ?: "tachiserver-data/config"
 
     val logger = KotlinLogging.logger {}
 
     /**
      * Get a config module
      */
-    inline fun <reified T : ConfigModule> module(): T
+    inline fun <reified T : ConfigModule> module(): T = loadedModules[T::class.java] as T
-            = loadedModules[T::class.java] as T
 
     /**
      * Get a config module (Java API)
      */
-    fun <T : ConfigModule> module(type: Class<T>): T
+    fun <T : ConfigModule> module(type: Class<T>): T = loadedModules[type] as T
-            = loadedModules[type] as T
 
     /**
      * Load configs
      */
     fun loadConfigs(): Config {
-        val configs = mutableListOf<Config>()
+        //Load reference configs
+        val compatConfig =  ConfigFactory.parseResources("compat-reference.conf")
+        val serverConfig = ConfigFactory.parseResources("server-reference.conf")
 
-        //Load reference config
+        //Load user config
-        configs += ConfigFactory.parseResources("reference.conf")
+        val userConfig =
+            File(appConfigFile).let{
+                    ConfigFactory.parseFile(it)
+            }
 
-        //Load custom configs from dir
+        val config = ConfigFactory.empty()
-        File(configFolder).listFiles()?.map {
+                .withFallback(userConfig)
-            ConfigFactory.parseFile(it)
+                .withFallback(compatConfig)
-        }?.filterNotNull()?.forEach {
+                .withFallback(serverConfig)
-            configs += it.withFallback(configs.last())
+                .resolve()
-        }
-
-        val config = configs.last().resolve()
 
         logger.debug {
             "Loaded config:\n" + config.root().render(ConfigRenderOptions.concise().setFormatted(true))

AndroidCompat/Config/src/main/java/xyz/nulldev/ts/config/ServerConfig.kt

@@ -1,35 +0,0 @@
-package xyz.nulldev.ts.config
-
-import com.typesafe.config.Config
-import java.io.File
-
-class ServerConfig(config: Config) : ConfigModule(config) {
-    val ip = config.getString("ip")
-    val port = config.getInt("port")
-
-    val allowConfigChanges = config.getBoolean("allowConfigChanges")
-    val enableWebUi = config.getBoolean("enableWebUi")
-    val useOldWebUi = config.getBoolean("useOldWebUi")
-    val prettyPrintApi = config.getBoolean("prettyPrintApi")
-    // TODO Apply to operation IDs
-    val disabledApiEndpoints = config.getStringList("disabledApiEndpoints").map(String::toLowerCase)
-    val enabledApiEndpoints = config.getStringList("enabledApiEndpoints").map(String::toLowerCase)
-    val httpInitializedPrintMessage = config.getString("httpInitializedPrintMessage")
-
-    val useExternalStaticFiles = config.getBoolean("useExternalStaticFiles")
-    val externalStaticFilesFolder = config.getString("externalStaticFilesFolder")
-
-    val rootDir = registerFile(config.getString("rootDir"))
-    val patchesDir = registerFile(config.getString("patchesDir"))
-
-    fun registerFile(file: String): File {
-        return File(file).apply {
-            mkdirs()
-        }
-    }
-
-    companion object {
-        fun register(config: Config)
-                = ServerConfig(config.getConfig("ts.server"))
-    }
-}

AndroidCompat/build.gradle.kts

@@ -18,9 +18,7 @@ repositories {
 
 dependencies {
     // Android stub library
-//    compileOnly( fileTree(File(rootProject.rootDir, "libs/android"), include: "*.jar")
     implementation(fileTree("lib/"))
-    implementation(fileTree("${rootProject.rootDir}/server/lib/dex2jar/"))
 
 
     // Android JAR libs
@@ -41,10 +39,10 @@ dependencies {
     compileOnly( group= "xmlpull", name= "xmlpull", version= "1.1.3.1")
 
     // Config API
-    implementation( project(":AndroidCompat:Config"))
+    implementation(project(":AndroidCompat:Config"))
 
-    // dex2jar
+    // dex2jar: https://github.com/DexPatcher/dex2jar/releases/tag/v2.1-20190905-lanchon
-//    compileOnly( "dex2jar:dex-translator")
+    compileOnly("com.github.DexPatcher.dex2jar:dex-tools:v2.1-20190905-lanchon")
 
     // APK parser
     compileOnly("net.dongliu:apk-parser:2.6.10")
@@ -55,7 +53,11 @@ dependencies {
     // AndroidX annotations
     compileOnly( "androidx.annotation:annotation:1.2.0-alpha01")
 
-//    compileOnly("io.reactivex:rxjava:1.3.8")
+    // substitute for duktape-android
+    // 'org.mozilla:rhino' includes some code that we don't need so use 'org.mozilla:rhino-runtime' instead
+    implementation("org.mozilla:rhino-runtime:1.7.13")
+    // 'org.mozilla:rhino-engine' provides the same interface as 'javax.script' a.k.a Nashorn
+    implementation("org.mozilla:rhino-engine:1.7.13")
 }
 
 //def fatJarTask = tasks.getByPath(':AndroidCompat:JVMPatch:fatJar')

AndroidCompat/getAndroid.ps1

@@ -0,0 +1,99 @@
+# Copyright (C) Contributors to the Suwayomi project
+#
+# This Source Code Form is subject to the terms of the Mozilla Public
+# License, v. 2.0. If a copy of the MPL was not distributed with this
+# file, You can obtain one at https://mozilla.org/MPL/2.0/.
+
+# This is a windows only PowerShell script to create android.jar stubs
+
+# foolproof against running from AndroidCompat dir instead of running from project root
+if ($(Split-Path -Path (Get-Location) -Leaf) -eq "AndroidCompat" ) {
+    Set-Location ..
+}
+
+Write-Output "Getting required Android.jar..."
+Remove-Item -Recurse -Force "tmp" -ErrorAction SilentlyContinue | Out-Null
+New-Item -ItemType Directory -Force -Path "tmp" | Out-Null
+
+$androidEncoded = (Invoke-WebRequest -Uri "https://android.googlesource.com/platform/prebuilts/sdk/+/3b8a524d25fa6c3d795afb1eece3f24870c60988/27/public/android.jar?format=TEXT").content
+
+$android_jar = (Get-Location).Path + "\tmp\android.jar"
+
+[IO.File]::WriteAllBytes($android_jar, [Convert]::FromBase64String($androidEncoded))
+
+# We need to remove any stub classes that we have implementations for
+Write-Output "Patching JAR..."
+
+function Remove-Files-Zip($zipfile, $path)
+{
+    [Reflection.Assembly]::LoadWithPartialName('System.IO.Compression') | Out-Null
+
+    $stream = New-Object IO.FileStream($zipfile, [IO.FileMode]::Open)
+    $mode   = [IO.Compression.ZipArchiveMode]::Update
+    $zip    = New-Object IO.Compression.ZipArchive($stream, $mode)
+
+    ($zip.Entries | Where-Object { $_.FullName -like $path }) | ForEach-Object { Write-Output "Deleting: $($_.FullName)"; $_.Delete() }
+
+    $zip.Dispose()
+    $stream.Close()
+    $stream.Dispose()
+}
+
+Write-Output "Removing org.json..."
+Remove-Files-Zip $android_jar 'org/json/*'
+
+Write-Output "Removing org.apache..."
+Remove-Files-Zip $android_jar 'org/apache/*'
+
+Write-Output "Removing org.w3c..."
+Remove-Files-Zip $android_jar 'org/w3c/*'
+
+Write-Output "Removing org.xml..."
+Remove-Files-Zip $android_jar 'org/xml/*'
+
+Write-Output "Removing org.xmlpull..."
+Remove-Files-Zip $android_jar 'org/xmlpull/*'
+
+Write-Output "Removing junit..."
+Remove-Files-Zip $android_jar 'junit/*'
+
+Write-Output "Removing javax..."
+Remove-Files-Zip $android_jar 'javax/*'
+
+Write-Output "Removing java..."
+Remove-Files-Zip $android_jar 'java/*'
+
+Write-Output "Removing overriden classes..."
+Remove-Files-Zip $android_jar 'android/app/Application.class'
+Remove-Files-Zip $android_jar 'android/app/Service.class'
+Remove-Files-Zip $android_jar 'android/net/Uri.class'
+Remove-Files-Zip $android_jar 'android/net/Uri$Builder.class'
+Remove-Files-Zip $android_jar 'android/os/Environment.class'
+Remove-Files-Zip $android_jar 'android/text/format/Formatter.class'
+Remove-Files-Zip $android_jar 'android/text/Html.class'
+
+function Dedupe($path)
+{
+    Push-Location $path
+    $classes = Get-ChildItem . *.* -Recurse | Where-Object { !$_.PSIsContainer }
+    $classes | ForEach-Object {
+        "Processing class: $($_.FullName)"
+        Remove-Files-Zip $android_jar "$($_.Name).class" | Out-Null
+        Remove-Files-Zip $android_jar "$($_.Name)$*.class" | Out-Null
+        Remove-Files-Zip $android_jar "$($_.Name)Kt.class" | Out-Null
+        Remove-Files-Zip $android_jar "$($_.Name)Kt$*.class" | Out-Null
+    }
+    Pop-Location
+}
+
+Dedupe "AndroidCompat/src/main/java"
+Dedupe "server/src/main/java"
+Dedupe "server/src/main/kotlin"
+
+Write-Output "Copying Android.jar to library folder..."
+Move-Item -Force $android_jar "AndroidCompat/lib/android.jar"
+
+Write-Output "Cleaning up..."
+Remove-Item -Recurse -Force "tmp"
+
+Write-Output "Done!"

AndroidCompat/getAndroid.sh

@@ -1,4 +1,19 @@
 #!/usr/bin/env bash
+
+# Copyright (C) Contributors to the Suwayomi project
+#
+# This Source Code Form is subject to the terms of the Mozilla Public
+# License, v. 2.0. If a copy of the MPL was not distributed with this
+# file, You can obtain one at https://mozilla.org/MPL/2.0/.
+
+# This is a bash script to create android.jar stubs
+
+# foolproof against running from AndroidCompat dir instead of running from project root
+if [ "$(basename $(pwd))" = "AndroidCompat" ]; then
+  cd ..
+fi
+
+
 echo "Getting required Android.jar..."
 rm -rf "tmp"
 mkdir -p "tmp"
@@ -6,7 +21,7 @@ pushd "tmp"
 
 curl "https://android.googlesource.com/platform/prebuilts/sdk/+/3b8a524d25fa6c3d795afb1eece3f24870c60988/27/public/android.jar?format=TEXT" | base64 --decode > android.jar
 
-# We need to remove any stub classes that we might use
+# We need to remove any stub classes that we have implementations for
 echo "Patching JAR..."
 
 echo "Removing org.json..."

AndroidCompat/src/main/java/com/squareup/duktape/Duktape.java

@@ -1,20 +1,12 @@
-/*
- * Copyright (C) 2015 Square, Inc.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *      http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
 package com.squareup.duktape;
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 import kotlin.NotImplementedError;
 
 import javax.script.ScriptEngine;
@@ -22,11 +14,18 @@ import javax.script.ScriptEngineManager;
 import javax.script.ScriptException;
 import java.io.Closeable;
 
-/** A simple EMCAScript (Javascript) interpreter. */
+/* Note (March 2021):
+ * The old implementation for duktape-android used the nashorn engine which is deprecated.
+ * This new implementation uses Mozilla's Rhino: https://github.com/mozilla/rhino
+ */
+
+/**
+ * A simple EMCAScript (Javascript) interpreter.
+ */
 public final class Duktape implements Closeable, AutoCloseable {
 
     private ScriptEngineManager factory = new ScriptEngineManager();
-    private ScriptEngine engine = factory.getEngineByName("JavaScript");
+    private ScriptEngine engine = factory.getEngineByName("rhino");
 
     /**
    * Create a new interpreter instance. Calls to this method <strong>must</strong> matched with
@@ -38,17 +37,6 @@ public final class Duktape implements Closeable, AutoCloseable {
 
     private Duktape() {}
 
-    /**
-   * Evaluate {@code script} and return a result. {@code fileName} will be used in error
-   * reporting. Note that the result must be one of the supported Java types or the call will
-   * return null.
-   *
-   * @throws DuktapeException if there is an error evaluating the script.
-   */
-    public synchronized Object evaluate(String script, String fileName) {
-        throw new NotImplementedError("Not implemented!");
-    }
-
     /**
    * Evaluate {@code script} and return a result. Note that the result must be one of the
    * supported Java types or the call will return null.
@@ -76,18 +64,18 @@ public final class Duktape implements Closeable, AutoCloseable {
         throw new NotImplementedError("Not implemented!");
     }
 
-    /**
+//    /**
-   * Attaches to a global JavaScript object called {@code name} that implements {@code type}.
+//   * Attaches to a global JavaScript object called {@code name} that implements {@code type}.
-   * {@code type} defines the interface implemented in JavaScript that will be accessible to Java.
+//   * {@code type} defines the interface implemented in JavaScript that will be accessible to Java.
-   * {@code type} must be an interface that does not extend any other interfaces, and cannot define
+//   * {@code type} must be an interface that does not extend any other interfaces, and cannot define
-   * any overloaded methods.
+//   * any overloaded methods.
-   * <p>Methods of the interface may return {@code void} or any of the following supported argument
+//   * <p>Methods of the interface may return {@code void} or any of the following supported argument
-   * types: {@code boolean}, {@link Boolean}, {@code int}, {@link Integer}, {@code double},
+//   * types: {@code boolean}, {@link Boolean}, {@code int}, {@link Integer}, {@code double},
-   * {@link Double}, {@link String}.
+//   * {@link Double}, {@link String}.
-   */
+//   */
-    public synchronized <T> T get(final String name, final Class<T> type) {
+//    public synchronized <T> T get(final String name, final Class<T> type) {
-        throw new NotImplementedError("Not implemented!");
+//        throw new NotImplementedError("Not implemented!");
-    }
+//    }
 
     /**
    * Release the native resources associated with this object. You <strong>must</strong> call this

AndroidCompat/src/main/java/com/squareup/duktape/DuktapeStub.java

@@ -0,0 +1,37 @@
+package com.squareup.duktape;
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+// part of tachiyomi-extensions which was originally licensed under Apache License Version 2.0
+
+
+import java.io.Closeable;
+import java.io.IOException;
+
+/** This is the reference Duktape stub that tachiyomi's extensions depend on.
+ * Intended to be used as a reference.
+ */
+public class DuktapeStub implements Closeable {
+
+    public static Duktape create() {
+        throw new RuntimeException("Stub!");
+    }
+
+    @Override
+    public synchronized void close() throws IOException {
+        throw new RuntimeException("Stub!");
+    }
+
+    public synchronized Object evaluate(String script) {
+        throw new RuntimeException("Stub!");
+    }
+
+    public synchronized <T> void set(String name, Class<T> type, T object) {
+        throw new RuntimeException("Stub!");
+    }
+
+}

AndroidCompat/src/main/resources/compat-reference.conf

@@ -1,6 +1,3 @@
-# Server ip and port bindings
-ts.server.ip = 0.0.0.0
-ts.server.port = 4567
 
 # Allow/disallow preference changes (useful for demos)
 ts.server.allowConfigChanges = true

README.md

@@ -1,3 +1,5 @@
+
+![image](https://github.com/Suwayomi/Tachidesk/raw/master/server/src/main/resources/icon/faviconlogo.png)
 # Tachidesk
 A free and open source manga reader that runs extensions built for [Tachiyomi](https://tachiyomi.org/). 
 
@@ -5,31 +7,80 @@ Tachidesk is as multi-platform as you can get. Any platform that runs java and/o
 
 Ability to read and write Tachiyomi compatible backups and syncing is a planned feature.
 
-## How do I run the thing?
+## Is this application usable? Should I test it?
-#### Prerequisites
+Here is a list of current features:
-You should have java 8 or newer and a modern browser installed. Also an internet connection is required as almost everything this app does is downloading stuff. 
 
-#### Running pre-built jar packages
+- Installing and executing Tachiyomi's Extensions, So you'll get the same sources.
-Download the latest (or a working more stable) release from [the repo branch](https://github.com/AriaMoradi/Tachidesk/tree/repo) or obtain it from [the releases section](https://github.com/AriaMoradi/Tachidesk/releases).
+- A library to save your mangas and categories to put them into.
+- Searching and browsing installed sources.
+- A decent chapter reader.
+- Ability to download Mangas for offline read(This partially works)
 
-Double click on the jar file or run `java -jar Tachidesk-latest.jar` or `java -jar Tachidesk-vX.Y.Z-rxxx.jar`
+**Note:** Keep in mind that Tachidesk is alpha software and can break rarely and/or with each update, so you may have to delete your data to fix it. See [General troubleshooting](#general-troubleshooting) and [Support and help](#support-and-help) if it happens.
 
-The server will be running on `http://localhost:4567` open this url in your browser.
+Anyways, for more info checkout [finished milestone #1](https://github.com/Suwayomi/Tachidesk/issues/2) and [milestone #2](https://github.com/Suwayomi/Tachidesk/projects/1) to see what's implemented in more detail.
 
-#### Running on Docker
+## Downloading and Running the app
+### All Operating Systems
+You should have The Java Runtime Environment(JRE) 8 or newer and a modern browser installed. Also an internet connection is required as almost everything this app does is downloading stuff. 
+
+Download the latest jar release from [the releases section](https://github.com/Suwayomi/Tachidesk/releases).
+
+Double click on the jar file or run `java -jar Tachidesk-vX.Y.Z-rxxx.jar` from a Terminal/Command Prompt window to run the app which will open a new browser window automatically. Also the System Tray Icon is your friend if you need to open the browser window again or close Tachidesk.
+
+### Windows
+Download the latest win32 release from [the releases section](https://github.com/Suwayomi/Tachidesk/releases).
+
+The Windows specific build has java bundled inside, so you don't have to install java to use it. Unzip `Tachidesk-vX.Y.Z-rxxx-win32.zip` and run `server.exe`. The rest works like the previous section.
+
+### Arch Linux
+You can install Tachidesk from the AUR
+```
+yay -S tachidesk
+```
+
+### Docker
 Check [arbuilder's repo](https://github.com/arbuilder/Tachidesk-docker) out for more details and the dockerfile.
 
+## General troubleshooting
+If the app breaks try deleting the directory below and re-running the app (**This will delete all your data!**) and if the problem persists open an issue. 
+
+On Mac OS X : `/Users/<Account>/Library/Application Support/Tachidesk`
+
+On Windows XP : `C:\Documents and Settings\<Account>\Application Data\Local Settings\Tachidesk`
+
+On Windows 7 and later : `C:\Users\<Account>\AppData\Local\Tachidesk`
+
+On Unix/Linux : `/home/<account>/.local/share/Tachidesk`
+
+## Support and help
+Join Tachidesk's [discord server](https://discord.gg/wgPyb7hE5d) to hang out with the community and receive support and help.
+
+## How does it work?
+This project has two components: 
+1. **server:** contains the implementation of [tachiyomi's extensions library](https://github.com/tachiyomiorg/extensions-lib) and uses an Android compatibility library to run apk extensions. All this concludes to serving a REST API to `webUI`.
+2. **webUI:** A react SPA project that works with the server to do the presentation.
+
 ## Building from source
-### Get Android stubs jar
+### Prerequisite: Get Android stubs jar
 #### Manual download
-Download [android.jar](https://raw.githubusercontent.com/AriaMoradi/Tachidesk/android-jar/android.jar) and put it under `AndroidCompat/lib`.
+Download [android.jar](https://raw.githubusercontent.com/Suwayomi/Tachidesk/android-jar/android.jar) and put it under `AndroidCompat/lib`.
-#### Building from source(needs `bash`, `curl`, `base64`, `zip` to work)
+#### Automated download(needs `bash`, `curl`, `base64`, `zip` to work)
-Run `scripts/getAndroid.sh` from project's root directory to download and rebuild the jar file from Google's repository.
+Run `AndroidCompat/getAndroid.sh`(MacOS/Linux) or `AndroidCompat/getAndroid.ps1`(Windows) from project's root directory to download and rebuild the jar file from Google's repository.
-### building the jar
+### Prerequisite: Software dependencies
-Run `./gradlew shadowJar` the resulting built jar file will be `server/build/Tachidesk-vX.Y.Z-rxxx.jar`.
+You need this software packages installed in order to build this project:
+- Java Development Kit and Java Runtime Environment version 8 or newer(both Oracle JDK and OpenJDK works)
+- Nodejs LTS or latest
+- Yarn
+### building the full-blown jar
+Run `./gradlew server:shadowJar`, the resulting built jar file will be `server/build/Tachidesk-vX.Y.Z-rxxx.jar`.
+### building without `webUI` bundled
+Delete the `server/src/main/resources/react` directory if exists from previous runs, then run `./gradlew server:shadowJar -x :webUI:copyBuild`, the resulting built jar file will be `server/build/Tachidesk-vX.Y.Z-rxxx.jar`.
+### building the Windows package
+Run `./gradlew windowsPackage`, the resulting built zip package file will be `server/build/Tachidesk-vX.Y.Z-rxxx-win32.zip`.
 ## Running for development purposes
 ### `server` module
-Run `./gradlew :server:run -x :webUI:copyBuild --stacktrace` to run the server
+Follow [Get Android stubs jar](#prerequisite-get-android-stubs-jar) then run `./gradlew :server:run -x :webUI:copyBuild --stacktrace` to run the server
 ### `webUI` module
 How to do it is described in `webUI/react/README.md` but for short,
  first cd into `webUI/react` then run `yarn` to install the node modules(do this only once)
@@ -37,23 +88,10 @@ How to do it is described in `webUI/react/README.md` but for short,
  then open `http://127.0.0.1:3000` in a modern browser. This is a `create-react-app` project
  and supports HMR and all the other goodies you'll need.
 
-## Is this application usable? Should I test it?
-If you'd ask me, I'd tell you If you want to read your manga **online** from tachiyomi or in one place and bypass all the ads, you can use Tachidesk.
-
-There are almost no quality of life features, including no library, no downloading for offline enjoyment and sadly no MangaDex search.
-
-Anyways, for more info checkout [finished milestone #1](https://github.com/AriaMoradi/Tachidesk/issues/2) and [milestone #2](https://github.com/AriaMoradi/Tachidesk/projects/1) to see what's implemented.
-
-## How does it work?
-This project has two components: 
-1. **server:** contains the implementation of [tachiyomi's extensions library](https://github.com/tachiyomiorg/extensions-lib) and uses an Android compatibility library to run apk extensions. All this concludes to serving a REST API to `webUI`.
-2. **webUI:** A react SPA project that works with the server to do the presentation.
-
-## Support
-Join Tachidesk's [discord server](https://discord.gg/wgPyb7hE5d) to hang out with the community and receive support.
-
 ## Credit
-The `AndroidCompat` module and `scripts/getAndroid.sh` was originally developed by [@null-dev](https://github.com/null-dev) for [TachiWeb-Server](https://github.com/Tachiweb/TachiWeb-server) and is licensed under `Apache License Version 2.0`.
+This project is a spiritual successor of [TachiWeb-Server](https://github.com/Tachiweb/TachiWeb-server), Many of the ideas and the groundwork adopted in this project comes from TachiWeb.
+
+The `AndroidCompat` module was originally developed by [@null-dev](https://github.com/null-dev) for [TachiWeb-Server](https://github.com/Tachiweb/TachiWeb-server) and is licensed under `Apache License Version 2.0`.
 
 Parts of [tachiyomi](https://github.com/tachiyomiorg/tachiyomi) is adopted into this codebase, also licensed under `Apache License Version 2.0`.
 
@@ -63,7 +101,7 @@ Changes to both codebases is licensed under `MPL v. 2.0` as the rest of this pro
 
 ## License
 
-    Copyright (C) 2020-2021 Aria Moradi and contributors
+    Copyright (C) Contributors to the Suwayomi project
 
     This Source Code Form is subject to the terms of the Mozilla Public
     License, v. 2.0. If a copy of the MPL was not distributed with this

build.gradle.kts

@@ -61,7 +61,7 @@ configure(listOf(
 
         // Logging
         implementation("org.slf4j:slf4j-api:1.7.30")
-        implementation("org.slf4j:slf4j-simple:1.7.30")
+        implementation("ch.qos.logback:logback-classic:1.2.3")
         implementation("io.github.microutils:kotlin-logging:2.0.3")
 
         // RxJava
@@ -76,5 +76,10 @@ configure(listOf(
 
         // dependency of :AndroidCompat:Config
         implementation("com.typesafe:config:1.4.0")
+        implementation("io.github.config4k:config4k:0.4.2")
+
+
+        // to get application content root
+        implementation("net.harawata:appdirs:1.2.0")
     }
 }

server/build.gradle.kts

@@ -6,9 +6,10 @@ plugins {
     application
     id("com.github.johnrengelman.shadow") version "6.1.0"
     id("org.jmailen.kotlinter") version "3.3.0"
+    id("edu.sc.seis.launch4j") version "2.4.9"
 }
 
-val TachideskVersion = "v0.1.4"
+val TachideskVersion = "v0.2.7"
 
 
 repositories {
@@ -56,43 +57,40 @@ dependencies {
 
     implementation("org.jsoup:jsoup:1.13.1")
     implementation("com.github.salomonbrys.kotson:kotson:2.5.0")
-    implementation("com.squareup.duktape:duktape-android:1.3.0")
 
 
     val coroutinesVersion = "1.3.9"
     implementation("org.jetbrains.kotlinx:kotlinx-coroutines-core:$coroutinesVersion")
 
-    // dex2jar
+    // dex2jar: https://github.com/DexPatcher/dex2jar/releases/tag/v2.1-20190905-lanchon
-    implementation(fileTree("lib/dex2jar/"))
+    implementation("com.github.DexPatcher.dex2jar:dex-tools:v2.1-20190905-lanchon")
+
 
     // api
     implementation("io.javalin:javalin:3.12.0")
-    implementation("org.slf4j:slf4j-simple:1.8.0-beta4")
-    implementation("org.slf4j:slf4j-api:1.8.0-beta4")
     implementation("com.fasterxml.jackson.core:jackson-databind:2.10.3")
 
-    // to get application content root
-    implementation("net.harawata:appdirs:1.2.0")
-
     // Exposed ORM
     val exposed_version = "0.28.1"
-    implementation ("org.jetbrains.exposed:exposed-core:$exposed_version")
+    implementation("org.jetbrains.exposed:exposed-core:$exposed_version")
-    implementation ("org.jetbrains.exposed:exposed-dao:$exposed_version")
+    implementation("org.jetbrains.exposed:exposed-dao:$exposed_version")
-    implementation ("org.jetbrains.exposed:exposed-jdbc:$exposed_version")
+    implementation("org.jetbrains.exposed:exposed-jdbc:$exposed_version")
-    implementation ("com.h2database:h2:1.4.199")
+    implementation("com.h2database:h2:1.4.199")
+
+    // tray icon
+    implementation("com.dorkbox:SystemTray:3.17")
 
 
     // AndroidCompat
     implementation(project(":AndroidCompat"))
     implementation(project(":AndroidCompat:Config"))
 
-
+    // uncomment to test extensions directly
-    testImplementation("org.jetbrains.kotlin:kotlin-test")
+//    implementation(fileTree("lib/"))
-    testImplementation("org.jetbrains.kotlin:kotlin-test-junit")
 }
 
+val name = "ir.armor.tachidesk.Main"
 application {
-    val name = "ir.armor.tachidesk.Main"
     mainClass.set(name)
 
     // Required by ShadowJar.
@@ -116,7 +114,7 @@ val TachideskRevision = Runtime
                 it.bufferedReader().use(BufferedReader::readText)
             }
             process.destroy()
-            "r"+output.trim()
+            "r" + output.trim()
 
         }
 
@@ -139,6 +137,63 @@ tasks {
     }
 }
 
+launch4j { //used for windows
+    mainClassName = name
+    bundledJrePath = "jre"
+    bundledJre64Bit = true
+    jreMinVersion = "8"
+    outputDir = "Tachidesk-$TachideskVersion-$TachideskRevision-win32"
+    icon = "${projectDir}/src/main/resources/icon/faviconlogo.ico"
+    jar = "${projectDir}/build/Tachidesk-$TachideskVersion-$TachideskRevision.jar"
+}
+
+tasks.register<Zip>("windowsPackage") {
+    from(fileTree("$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32"))
+    destinationDirectory.set(File("$buildDir"))
+    archiveFileName.set("Tachidesk-$TachideskVersion-$TachideskRevision-win32.zip")
+    dependsOn("windowsPackageWorkaround2")
+}
+
+tasks.register<Delete>("windowsPackageWorkaround2") {
+    delete(
+            "$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/jre",
+            "$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/lib",
+            "$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/server.exe",
+            "$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/Tachidesk-$TachideskVersion-$TachideskRevision-win32/Tachidesk-$TachideskVersion-$TachideskRevision-win32"
+    )
+    dependsOn("windowsPackageWorkaround")
+}
+
+tasks.register<Copy>("windowsPackageWorkaround") {
+    from("$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32")
+    into("$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/Tachidesk-$TachideskVersion-$TachideskRevision-win32")
+    dependsOn("deleteUnwantedJreDir")
+}
+
+tasks.register<Delete>("deleteUnwantedJreDir") {
+    delete(
+            "$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32/jdk8u282-b08-jre"
+    )
+    dependsOn("addJreToDistributable")
+}
+
+tasks.register<Copy>("addJreToDistributable") {
+    from(zipTree("$buildDir/OpenJDK8U-jre_x86-32_windows_hotspot_8u282b08.zip"))
+    into("$buildDir/Tachidesk-$TachideskVersion-$TachideskRevision-win32")
+    eachFile {
+        path = path.replace(".*-jre".toRegex(),"jre")
+    }
+    dependsOn("downloadJre")
+    dependsOn("createExe")
+}
+
+tasks.register<de.undercouch.gradle.tasks.download.Download>("downloadJre") {
+    src("https://github.com/AdoptOpenJDK/openjdk8-binaries/releases/download/jdk8u282-b08/OpenJDK8U-jre_x86-32_windows_hotspot_8u282b08.zip")
+    dest(buildDir)
+    overwrite(false)
+    onlyIfModified(true)
+}
+
 tasks.withType<ShadowJar> {
     destinationDir = File("$rootDir/server/build")
     dependsOn("lintKotlin")

server/src/main/java/ir/armor/tachidesk/APKExtractor.java

@@ -1,252 +0,0 @@
-package ir.armor.tachidesk;
-
-/* This Source Code Form is subject to the terms of the Mozilla Public
- * License, v. 2.0. If a copy of the MPL was not distributed with this
- * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
-
-import org.w3c.dom.Document;
-import org.w3c.dom.NamedNodeMap;
-import org.w3c.dom.NodeList;
-import org.xml.sax.InputSource;
-
-import javax.xml.parsers.DocumentBuilder;
-import javax.xml.parsers.DocumentBuilderFactory;
-import java.io.*;
-import java.nio.file.Files;
-import java.nio.file.Paths;
-import java.util.zip.ZipEntry;
-import java.util.zip.ZipFile;
-import java.util.zip.ZipInputStream;
-
-public class APKExtractor {
-    // decompressXML -- Parse the 'compressed' binary form of Android XML docs
-    // such as for AndroidManifest.xml in .apk files
-    public static int endDocTag = 0x00100101;
-    public static int startTag = 0x00100102;
-    public static int endTag = 0x00100103;
-
-    static void prt(String str) {
-        //System.err.print(str);
-    }
-
-    public static String decompressXML(byte[] xml) {
-
-        StringBuilder finalXML = new StringBuilder();
-
-        // Compressed XML file/bytes starts with 24x bytes of data,
-        // 9 32 bit words in little endian order (LSB first):
-        // 0th word is 03 00 08 00
-        // 3rd word SEEMS TO BE: Offset at then of StringTable
-        // 4th word is: Number of strings in string table
-        // WARNING: Sometime I indiscriminently display or refer to word in
-        // little endian storage format, or in integer format (ie MSB first).
-        int numbStrings = LEW(xml, 4 * 4);
-
-        // StringIndexTable starts at offset 24x, an array of 32 bit LE offsets
-        // of the length/string data in the StringTable.
-        int sitOff = 0x24; // Offset of start of StringIndexTable
-
-        // StringTable, each string is represented with a 16 bit little endian
-        // character count, followed by that number of 16 bit (LE) (Unicode)
-        // chars.
-        int stOff = sitOff + numbStrings * 4; // StringTable follows
-        // StrIndexTable
-
-        // XMLTags, The XML tag tree starts after some unknown content after the
-        // StringTable. There is some unknown data after the StringTable, scan
-        // forward from this point to the flag for the start of an XML start
-        // tag.
-        int xmlTagOff = LEW(xml, 3 * 4); // Start from the offset in the 3rd
-        // word.
-        // Scan forward until we find the bytes: 0x02011000(x00100102 in normal
-        // int)
-        for (int ii = xmlTagOff; ii < xml.length - 4; ii += 4) {
-            if (LEW(xml, ii) == startTag) {
-                xmlTagOff = ii;
-                break;
-            }
-        } // end of hack, scanning for start of first start tag
-
-        // XML tags and attributes:
-        // Every XML start and end tag consists of 6 32 bit words:
-        // 0th word: 02011000 for startTag and 03011000 for endTag
-        // 1st word: a flag?, like 38000000
-        // 2nd word: Line of where this tag appeared in the original source file
-        // 3rd word: FFFFFFFF ??
-        // 4th word: StringIndex of NameSpace name, or FFFFFFFF for default NS
-        // 5th word: StringIndex of Element Name
-        // (Note: 01011000 in 0th word means end of XML document, endDocTag)
-
-        // Start tags (not end tags) contain 3 more words:
-        // 6th word: 14001400 meaning??
-        // 7th word: Number of Attributes that follow this tag(follow word 8th)
-        // 8th word: 00000000 meaning??
-
-        // Attributes consist of 5 words:
-        // 0th word: StringIndex of Attribute Name's Namespace, or FFFFFFFF
-        // 1st word: StringIndex of Attribute Name
-        // 2nd word: StringIndex of Attribute Value, or FFFFFFF if ResourceId
-        // used
-        // 3rd word: Flags?
-        // 4th word: str ind of attr value again, or ResourceId of value
-
-        // TMP, dump string table to tr for debugging
-        // tr.addSelect("strings", null);
-        // for (int ii=0; ii<numbStrings; ii++) {
-        // // Length of string starts at StringTable plus offset in StrIndTable
-        // String str = compXmlString(xml, sitOff, stOff, ii);
-        // tr.add(String.valueOf(ii), str);
-        // }
-        // tr.parent();
-
-        // Step through the XML tree element tags and attributes
-        int off = xmlTagOff;
-        int indent = 0;
-        int startTagLineNo = -2;
-        while (off < xml.length) {
-            int tag0 = LEW(xml, off);
-            // int tag1 = LEW(xml, off+1*4);
-            int lineNo = LEW(xml, off + 2 * 4);
-            // int tag3 = LEW(xml, off+3*4);
-            int nameNsSi = LEW(xml, off + 4 * 4);
-            int nameSi = LEW(xml, off + 5 * 4);
-
-            if (tag0 == startTag) { // XML START TAG
-                int tag6 = LEW(xml, off + 6 * 4); // Expected to be 14001400
-                int numbAttrs = LEW(xml, off + 7 * 4); // Number of Attributes
-                // to follow
-                // int tag8 = LEW(xml, off+8*4); // Expected to be 00000000
-                off += 9 * 4; // Skip over 6+3 words of startTag data
-                String name = compXmlString(xml, sitOff, stOff, nameSi);
-                // tr.addSelect(name, null);
-                startTagLineNo = lineNo;
-
-                // Look for the Attributes
-                StringBuffer sb = new StringBuffer();
-                for (int ii = 0; ii < numbAttrs; ii++) {
-                    int attrNameNsSi = LEW(xml, off); // AttrName Namespace Str
-                    // Ind, or FFFFFFFF
-                    int attrNameSi = LEW(xml, off + 1 * 4); // AttrName String
-                    // Index
-                    int attrValueSi = LEW(xml, off + 2 * 4); // AttrValue Str
-                    // Ind, or
-                    // FFFFFFFF
-                    int attrFlags = LEW(xml, off + 3 * 4);
-                    int attrResId = LEW(xml, off + 4 * 4); // AttrValue
-                    // ResourceId or dup
-                    // AttrValue StrInd
-                    off += 5 * 4; // Skip over the 5 words of an attribute
-
-                    String attrName = compXmlString(xml, sitOff, stOff,
-                            attrNameSi);
-                    String attrValue = attrValueSi != -1 ? compXmlString(xml,
-                            sitOff, stOff, attrValueSi) : "resourceID 0x"
-                            + Integer.toHexString(attrResId);
-                    sb.append(" " + attrName + "=\"" + attrValue + "\"");
-                    // tr.add(attrName, attrValue);
-                }
-                finalXML.append("<" + name + sb + ">");
-                prtIndent(indent, "<" + name + sb + ">");
-                indent++;
-
-            } else if (tag0 == endTag) { // XML END TAG
-                indent--;
-                off += 6 * 4; // Skip over 6 words of endTag data
-                String name = compXmlString(xml, sitOff, stOff, nameSi);
-                finalXML.append("</" + name + ">");
-                prtIndent(indent, "</" + name + "> (line " + startTagLineNo
-                        + "-" + lineNo + ")");
-                // tr.parent(); // Step back up the NobTree
-
-            } else if (tag0 == endDocTag) { // END OF XML DOC TAG
-                break;
-
-            } else {
-                prt("  Unrecognized tag code '" + Integer.toHexString(tag0)
-                        + "' at offset " + off);
-                break;
-            }
-        } // end of while loop scanning tags and attributes of XML tree
-        //prt("    end at offset " + off);
-        return finalXML.toString();
-    } // end of decompressXML
-
-    public static String compXmlString(byte[] xml, int sitOff, int stOff, int strInd) {
-        if (strInd < 0)
-            return null;
-        int strOff = stOff + LEW(xml, sitOff + strInd * 4);
-        return compXmlStringAt(xml, strOff);
-    }
-
-    public static String spaces = "                                             ";
-
-    public static void prtIndent(int indent, String str) {
-        prt(spaces.substring(0, Math.min(indent * 2, spaces.length())) + str);
-    }
-
-    // compXmlStringAt -- Return the string stored in StringTable format at
-    // offset strOff. This offset points to the 16 bit string length, which
-    // is followed by that number of 16 bit (Unicode) chars.
-    public static String compXmlStringAt(byte[] arr, int strOff) {
-        int strLen = arr[strOff + 1] << 8 & 0xff00 | arr[strOff] & 0xff;
-        byte[] chars = new byte[strLen];
-        for (int ii = 0; ii < strLen; ii++) {
-            chars[ii] = arr[strOff + 2 + ii * 2];
-        }
-        return new String(chars); // Hack, just use 8 byte chars
-    } // end of compXmlStringAt
-
-    // LEW -- Return value of a Little Endian 32 bit word from the byte array
-    // at offset off.
-    public static int LEW(byte[] arr, int off) {
-        return arr[off + 3] << 24 & 0xff000000 | arr[off + 2] << 16 & 0xff0000
-                | arr[off + 1] << 8 & 0xff00 | arr[off] & 0xFF;
-    } // end of LEW
-
-    public static Document loadXMLFromString(String xml) throws Exception {
-        DocumentBuilderFactory docBuilderFactory = DocumentBuilderFactory.newInstance();
-        DocumentBuilder docBuilder = docBuilderFactory.newDocumentBuilder();
-        return docBuilder.parse(new InputSource(new StringReader(xml)));
-    }
-
-    public static String extract_dex_and_read_className(String filePath, String dexPath) throws IOException {
-        ZipFile zip = null;
-
-        zip = new ZipFile(filePath);
-        ZipEntry androidManifest = zip.getEntry("AndroidManifest.xml");
-        ZipEntry classesDex = zip.getEntry("classes.dex");
-
-        // write dex file
-        InputStream dexStream = zip.getInputStream(classesDex);
-        try (OutputStream os = Files.newOutputStream(Paths.get(dexPath))) {
-            byte[] buffer = new byte[1024];
-            int len;
-            while ((len = dexStream.read(buffer)) > 0) {
-                os.write(buffer, 0, len);
-            }
-        }
-
-        // read xml file
-        InputStream is = zip.getInputStream(androidManifest);
-        byte[] buf = new byte[1024000]; // 100 kb
-        is.read(buf);
-        is.close();
-        zip.close();
-
-        String xml = APKExtractor.decompressXML(buf);
-        try {
-            Document xmlDoc = loadXMLFromString(xml);
-            String pkg = xmlDoc.getDocumentElement().getAttribute("package");
-            NodeList nodes = xmlDoc.getElementsByTagName("meta-data");
-            for (int i = 0; i < nodes.getLength(); i++) {
-                NamedNodeMap attributes = nodes.item(i).getAttributes();
-                System.out.println(attributes.getNamedItem("name").getNodeValue());
-                if (attributes.getNamedItem("name").getNodeValue().equals("tachiyomi.extension.class"))
-                    return pkg + attributes.getNamedItem("value").getNodeValue();
-            }
-        } catch (Exception e) {
-            e.printStackTrace();
-        }
-        return "";
-    }
-}

server/src/main/kotlin/eu/kanade/tachiyomi/App.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 import android.app.Application
 import android.content.Context
 // import android.content.res.Configuration

server/src/main/kotlin/eu/kanade/tachiyomi/AppModule.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 import android.app.Application
 import com.google.gson.Gson
 // import eu.kanade.tachiyomi.data.cache.ChapterCache

server/src/main/kotlin/eu/kanade/tachiyomi/extension/api/ExtensionGithubApi.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi.extension.api
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 // import android.content.Context
 // import eu.kanade.tachiyomi.data.preference.PreferencesHelper
 import eu.kanade.tachiyomi.extension.model.Extension

server/src/main/kotlin/eu/kanade/tachiyomi/extension/util/ExtensionLoader.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi.extension.util
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 // import android.annotation.SuppressLint
 // import android.content.Context
 // import android.content.pm.PackageInfo

server/src/main/kotlin/eu/kanade/tachiyomi/network/CloudflareInterceptor.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi.network
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 // import android.annotation.SuppressLint
 // import android.content.Context
 // import android.os.Build

server/src/main/kotlin/eu/kanade/tachiyomi/network/MemoryCookieJar.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi.network
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 import okhttp3.Cookie
 import okhttp3.CookieJar
 import okhttp3.HttpUrl

server/src/main/kotlin/eu/kanade/tachiyomi/network/NetworkHelper.kt

@@ -1,5 +1,12 @@
 package eu.kanade.tachiyomi.network
 
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
 // import android.content.Context
 // import eu.kanade.tachiyomi.BuildConfig
 // import eu.kanade.tachiyomi.data.preference.PreferencesHelper

server/src/main/kotlin/ir/armor/tachidesk/Config.kt

@@ -1,14 +0,0 @@
-package ir.armor.tachidesk
-
-/* This Source Code Form is subject to the terms of the Mozilla Public
- * License, v. 2.0. If a copy of the MPL was not distributed with this
- * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
-
-import net.harawata.appdirs.AppDirsFactory
-
-object Config {
-    val dataRoot = AppDirsFactory.getInstance().getUserDataDir("Tachidesk", null, null)
-    val extensionsRoot = "$dataRoot/extensions"
-    val thumbnailsRoot = "$dataRoot/thumbnails"
-    val mangaRoot = "$dataRoot/manga"
-}

server/src/main/kotlin/ir/armor/tachidesk/Main.kt

@@ -1,172 +1,22 @@
 package ir.armor.tachidesk
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
-import eu.kanade.tachiyomi.App
+import ir.armor.tachidesk.server.applicationSetup
-import io.javalin.Javalin
+import ir.armor.tachidesk.server.javalinSetup
-import ir.armor.tachidesk.util.applicationSetup
-import ir.armor.tachidesk.util.getChapter
-import ir.armor.tachidesk.util.getChapterList
-import ir.armor.tachidesk.util.getExtensionList
-import ir.armor.tachidesk.util.getManga
-import ir.armor.tachidesk.util.getMangaList
-import ir.armor.tachidesk.util.getPageImage
-import ir.armor.tachidesk.util.getSource
-import ir.armor.tachidesk.util.getSourceList
-import ir.armor.tachidesk.util.getThumbnail
-import ir.armor.tachidesk.util.installAPK
-import ir.armor.tachidesk.util.removeExtension
-import ir.armor.tachidesk.util.sourceFilters
-import ir.armor.tachidesk.util.sourceGlobalSearch
-import ir.armor.tachidesk.util.sourceSearch
-import org.kodein.di.DI
-import org.kodein.di.conf.global
-import xyz.nulldev.androidcompat.AndroidCompat
-import xyz.nulldev.androidcompat.AndroidCompatInitializer
-import xyz.nulldev.ts.config.ConfigKodeinModule
-import xyz.nulldev.ts.config.GlobalConfigManager
 
 class Main {
     companion object {
-        val androidCompat by lazy { AndroidCompat() }
-
-        fun registerConfigModules() {
-            GlobalConfigManager.registerModules(
-//                    ServerConfig.register(GlobalConfigManager.config),
-//                    SyncConfigModule.register(GlobalConfigManager.config)
-            )
-        }
 
         @JvmStatic
         fun main(args: Array<String>) {
-//            System.getProperties()["proxySet"] = "true"
-//            System.getProperties()["socksProxyHost"] = "127.0.0.1"
-//            System.getProperties()["socksProxyPort"] = "2020"
-
-            // make sure everything we need exists
             applicationSetup()
-
+            javalinSetup()
-            registerConfigModules()
-
-            // Load config API
-            DI.global.addImport(ConfigKodeinModule().create())
-            // Load Android compatibility dependencies
-            AndroidCompatInitializer().init()
-            // start app
-            androidCompat.startApp(App())
-
-//            Thread(getMangaUpdateQueueThread).start()
-
-            val app = Javalin.create { config ->
-                try {
-                    this::class.java.classLoader.getResource("/react/index.html")
-                    config.addStaticFiles("/react")
-                    config.addSinglePageRoot("/", "/react/index.html")
-                } catch (e: RuntimeException) {
-                    println("Warning: react build files are missing.")
-                }
-            }.start(4567)
-
-            app.before() { ctx ->
-                // allow the client which is running on another port
-                ctx.header("Access-Control-Allow-Origin", "*")
-            }
-
-            app.get("/api/v1/extension/list") { ctx ->
-                ctx.json(getExtensionList())
-            }
-
-            app.get("/api/v1/extension/install/:apkName") { ctx ->
-                val apkName = ctx.pathParam("apkName")
-                println("installing $apkName")
-
-                ctx.status(
-                    installAPK(apkName)
-                )
-            }
-
-            app.get("/api/v1/extension/uninstall/:apkName") { ctx ->
-                val apkName = ctx.pathParam("apkName")
-                println("uninstalling $apkName")
-                removeExtension(apkName)
-                ctx.status(200)
-            }
-
-            app.get("/api/v1/source/list") { ctx ->
-                ctx.json(getSourceList())
-            }
-
-            app.get("/api/v1/source/:sourceId") { ctx ->
-                val sourceId = ctx.pathParam("sourceId").toLong()
-                ctx.json(getSource(sourceId))
-            }
-
-            app.get("/api/v1/source/:sourceId/popular/:pageNum") { ctx ->
-                val sourceId = ctx.pathParam("sourceId").toLong()
-                val pageNum = ctx.pathParam("pageNum").toInt()
-                ctx.json(getMangaList(sourceId, pageNum, popular = true))
-            }
-            app.get("/api/v1/source/:sourceId/latest/:pageNum") { ctx ->
-                val sourceId = ctx.pathParam("sourceId").toLong()
-                val pageNum = ctx.pathParam("pageNum").toInt()
-                ctx.json(getMangaList(sourceId, pageNum, popular = false))
-            }
-
-            app.get("/api/v1/manga/:mangaId/") { ctx ->
-                val mangaId = ctx.pathParam("mangaId").toInt()
-                ctx.json(getManga(mangaId))
-            }
-
-            app.get("api/v1/manga/:mangaId/thumbnail") { ctx ->
-                val mangaId = ctx.pathParam("mangaId").toInt()
-                val result = getThumbnail(mangaId)
-
-                ctx.result(result.first)
-                ctx.header("content-type", result.second)
-            }
-
-            app.get("/api/v1/manga/:mangaId/chapters") { ctx ->
-                val mangaId = ctx.pathParam("mangaId").toInt()
-                ctx.json(getChapterList(mangaId))
-            }
-
-            app.get("/api/v1/manga/:mangaId/chapter/:chapterId") { ctx ->
-                val chapterId = ctx.pathParam("chapterId").toInt()
-                val mangaId = ctx.pathParam("mangaId").toInt()
-                ctx.json(getChapter(chapterId, mangaId))
-            }
-
-            app.get("/api/v1/manga/:mangaId/chapter/:chapterId/page/:index") { ctx ->
-                val chapterId = ctx.pathParam("chapterId").toInt()
-                val mangaId = ctx.pathParam("mangaId").toInt()
-                val index = ctx.pathParam("index").toInt()
-                val result = getPageImage(mangaId, chapterId, index)
-
-                ctx.result(result.first)
-                ctx.header("content-type", result.second)
-            }
-
-            // global search
-            app.get("/api/v1/search/:searchTerm") { ctx ->
-                val searchTerm = ctx.pathParam("searchTerm")
-                ctx.json(sourceGlobalSearch(searchTerm))
-            }
-
-            // single source search
-            app.get("/api/v1/source/:sourceId/search/:searchTerm/:pageNum") { ctx ->
-                val sourceId = ctx.pathParam("sourceId").toLong()
-                val searchTerm = ctx.pathParam("searchTerm")
-                val pageNum = ctx.pathParam("pageNum").toInt()
-                ctx.json(sourceSearch(sourceId, searchTerm, pageNum))
-            }
-
-            // source filter list
-            app.get("/api/v1/source/:sourceId/filters/") { ctx ->
-                val sourceId = ctx.pathParam("sourceId").toLong()
-                ctx.json(sourceFilters(sourceId))
-            }
         }
     }
 }

server/src/main/kotlin/ir/armor/tachidesk/database/DBMangaer.kt

@@ -1,36 +1,44 @@
 package ir.armor.tachidesk.database
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
-import ir.armor.tachidesk.Config
+import ir.armor.tachidesk.database.table.CategoryMangaTable
+import ir.armor.tachidesk.database.table.CategoryTable
 import ir.armor.tachidesk.database.table.ChapterTable
-import ir.armor.tachidesk.database.table.ExtensionsTable
+import ir.armor.tachidesk.database.table.ExtensionTable
 import ir.armor.tachidesk.database.table.MangaTable
 import ir.armor.tachidesk.database.table.PageTable
 import ir.armor.tachidesk.database.table.SourceTable
+import ir.armor.tachidesk.server.applicationDirs
 import org.jetbrains.exposed.sql.Database
 import org.jetbrains.exposed.sql.SchemaUtils
 import org.jetbrains.exposed.sql.transactions.transaction
 
 object DBMangaer {
     val db by lazy {
-        Database.connect("jdbc:h2:${Config.dataRoot}/database.h2", "org.h2.Driver")
+        Database.connect("jdbc:h2:${applicationDirs.dataRoot}/database", "org.h2.Driver")
     }
 }
 
 fun makeDataBaseTables() {
-    // mention db object to connect
+    // must mention db object so the lazy block executes
-    DBMangaer.db
+    val db = DBMangaer.db
-//    val db = DBMangaer.db
+    db.useNestedTransactions = true
-//    db.useNestedTransactions = true
 
     transaction {
-        SchemaUtils.create(ExtensionsTable)
+        SchemaUtils.createMissingTablesAndColumns(
-        SchemaUtils.create(SourceTable)
+            ExtensionTable,
-        SchemaUtils.create(MangaTable)
+            SourceTable,
-        SchemaUtils.create(ChapterTable)
+            MangaTable,
-        SchemaUtils.create(PageTable)
+            ChapterTable,
+            PageTable,
+            CategoryTable,
+            CategoryMangaTable,
+        )
     }
 }

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/CategoryDataClass.kt

@@ -0,0 +1,15 @@
+package ir.armor.tachidesk.database.dataclass
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+data class CategoryDataClass(
+    val id: Int,
+    val order: Int,
+    val name: String,
+    val isLanding: Boolean
+)

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/ChapterDataClass.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.dataclass
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -12,5 +15,7 @@ data class ChapterDataClass(
     val chapter_number: Float,
     val scanlator: String?,
     val mangaId: Int,
+    val chapterIndex: Int,
+    val chapterCount: Int,
     val pageCount: Int? = null,
 )

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/ExtensionDataClass.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.dataclass
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/MangaDataClass.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.dataclass
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -8,7 +11,7 @@ import ir.armor.tachidesk.database.table.MangaStatus
 
 data class MangaDataClass(
     val id: Int,
-    val sourceId: Long,
+    val sourceId: String,
 
     val url: String,
     val title: String,
@@ -20,7 +23,9 @@ data class MangaDataClass(
     val author: String? = null,
     val description: String? = null,
     val genre: String? = null,
-    val status: String = MangaStatus.UNKNOWN.name
+    val status: String = MangaStatus.UNKNOWN.name,
+    val inLibrary: Boolean = false,
+    val source: SourceDataClass? = null
 )
 
 data class PagedMangaListDataClass(

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/PageDataClass.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.dataclass
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/database/dataclass/SourceDataClass.kt

@@ -1,13 +1,16 @@
 package ir.armor.tachidesk.database.dataclass
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 data class SourceDataClass(
     val id: String,
-    val name: String,
+    val name: String?,
-    val lang: String,
+    val lang: String?,
-    val iconUrl: String,
+    val iconUrl: String?,
-    val supportsLatest: Boolean
+    val supportsLatest: Boolean?
 )

server/src/main/kotlin/ir/armor/tachidesk/database/entity/ExtensionEntity.kt

@@ -1,25 +1,28 @@
 package ir.armor.tachidesk.database.entity
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
-import ir.armor.tachidesk.database.table.ExtensionsTable
+import ir.armor.tachidesk.database.table.ExtensionTable
 import org.jetbrains.exposed.dao.IntEntity
 import org.jetbrains.exposed.dao.IntEntityClass
 import org.jetbrains.exposed.dao.id.EntityID
 
 class ExtensionEntity(id: EntityID<Int>) : IntEntity(id) {
-    companion object : IntEntityClass<ExtensionEntity>(ExtensionsTable)
+    companion object : IntEntityClass<ExtensionEntity>(ExtensionTable)
 
-    var name by ExtensionsTable.name
+    var name by ExtensionTable.name
-    var pkgName by ExtensionsTable.pkgName
+    var pkgName by ExtensionTable.pkgName
-    var versionName by ExtensionsTable.versionName
+    var versionName by ExtensionTable.versionName
-    var versionCode by ExtensionsTable.versionCode
+    var versionCode by ExtensionTable.versionCode
-    var lang by ExtensionsTable.lang
+    var lang by ExtensionTable.lang
-    var isNsfw by ExtensionsTable.isNsfw
+    var isNsfw by ExtensionTable.isNsfw
-    var apkName by ExtensionsTable.apkName
+    var apkName by ExtensionTable.apkName
-    var iconUrl by ExtensionsTable.iconUrl
+    var iconUrl by ExtensionTable.iconUrl
-    var installed by ExtensionsTable.installed
+    var installed by ExtensionTable.installed
-    var classFQName by ExtensionsTable.classFQName
+    var classFQName by ExtensionTable.classFQName
 }

server/src/main/kotlin/ir/armor/tachidesk/database/entity/MangaEntity.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.entity
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/database/entity/SourceEntity.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.entity
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/database/table/CategoryMangaTable.kt

@@ -0,0 +1,15 @@
+package ir.armor.tachidesk.database.table
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import org.jetbrains.exposed.dao.id.IntIdTable
+
+object CategoryMangaTable : IntIdTable() {
+    val category = reference("category", CategoryTable)
+    val manga = reference("manga", MangaTable)
+}

server/src/main/kotlin/ir/armor/tachidesk/database/table/CategoryTable.kt

@@ -0,0 +1,25 @@
+package ir.armor.tachidesk.database.table
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import ir.armor.tachidesk.database.dataclass.CategoryDataClass
+import org.jetbrains.exposed.dao.id.IntIdTable
+import org.jetbrains.exposed.sql.ResultRow
+
+object CategoryTable : IntIdTable() {
+    val name = varchar("name", 64)
+    val isLanding = bool("is_landing").default(false)
+    val order = integer("order").default(0)
+}
+
+fun CategoryTable.toDataClass(categoryEntry: ResultRow) = CategoryDataClass(
+    categoryEntry[CategoryTable.id].value,
+    categoryEntry[CategoryTable.order],
+    categoryEntry[CategoryTable.name],
+    categoryEntry[CategoryTable.isLanding],
+)

server/src/main/kotlin/ir/armor/tachidesk/database/table/ChapterTable.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.table
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -13,5 +16,7 @@ object ChapterTable : IntIdTable() {
     val chapter_number = float("chapter_number").default(-1f)
     val scanlator = varchar("scanlator", 128).nullable()
 
+    val chapterIndex = integer("number_in_list")
+
     val manga = reference("manga", MangaTable)
 }

server/src/main/kotlin/ir/armor/tachidesk/database/table/ExtensionTable.kt

@@ -1,12 +1,15 @@
 package ir.armor.tachidesk.database.table
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import org.jetbrains.exposed.dao.id.IntIdTable
 
-object ExtensionsTable : IntIdTable() {
+object ExtensionTable : IntIdTable() {
     val name = varchar("name", 128)
     val pkgName = varchar("pkg_name", 128)
     val versionName = varchar("version_name", 16)

server/src/main/kotlin/ir/armor/tachidesk/database/table/MangaTable.kt

@@ -1,11 +1,17 @@
 package ir.armor.tachidesk.database.table
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import eu.kanade.tachiyomi.source.model.SManga
+import ir.armor.tachidesk.database.dataclass.MangaDataClass
+import ir.armor.tachidesk.impl.proxyThumbnailUrl
 import org.jetbrains.exposed.dao.id.IntIdTable
+import org.jetbrains.exposed.sql.ResultRow
 
 object MangaTable : IntIdTable() {
     val url = varchar("url", 2048)
@@ -21,10 +27,32 @@ object MangaTable : IntIdTable() {
     val status = integer("status").default(SManga.UNKNOWN)
     val thumbnail_url = varchar("thumbnail_url", 2048).nullable()
 
+    val inLibrary = bool("in_library").default(false)
+    val defaultCategory = bool("default_category").default(true)
+
     // source is used by some ancestor of IntIdTable
-    val sourceReference = reference("source", SourceTable)
+    val sourceReference = long("source")
 }
 
+fun MangaTable.toDataClass(mangaEntry: ResultRow) =
+    MangaDataClass(
+        mangaEntry[MangaTable.id].value,
+        mangaEntry[sourceReference].toString(),
+
+        mangaEntry[MangaTable.url],
+        mangaEntry[MangaTable.title],
+        proxyThumbnailUrl(mangaEntry[MangaTable.id].value),
+
+        mangaEntry[MangaTable.initialized],
+
+        mangaEntry[MangaTable.artist],
+        mangaEntry[MangaTable.author],
+        mangaEntry[MangaTable.description],
+        mangaEntry[MangaTable.genre],
+        MangaStatus.valueOf(mangaEntry[MangaTable.status]).name,
+        mangaEntry[MangaTable.inLibrary]
+    )
+
 enum class MangaStatus(val status: Int) {
     UNKNOWN(0),
     ONGOING(1),

server/src/main/kotlin/ir/armor/tachidesk/database/table/PageTable.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.table
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/database/table/SourceTable.kt

@@ -1,6 +1,9 @@
 package ir.armor.tachidesk.database.table
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -10,7 +13,7 @@ object SourceTable : IdTable<Long>() {
     override val id = long("id").entityId()
     val name = varchar("name", 128)
     val lang = varchar("lang", 10)
-    val extension = reference("extension", ExtensionsTable)
+    val extension = reference("extension", ExtensionTable)
     val partOfFactorySource = bool("part_of_factory_source").default(false)
     val positionInFactorySource = integer("position_in_factory_source").nullable()
 }

server/src/main/kotlin/ir/armor/tachidesk/impl/Category.kt

@@ -0,0 +1,69 @@
+package ir.armor.tachidesk.impl
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import ir.armor.tachidesk.database.dataclass.CategoryDataClass
+import ir.armor.tachidesk.database.table.CategoryMangaTable
+import ir.armor.tachidesk.database.table.CategoryTable
+import ir.armor.tachidesk.database.table.toDataClass
+import org.jetbrains.exposed.sql.SortOrder
+import org.jetbrains.exposed.sql.deleteWhere
+import org.jetbrains.exposed.sql.insert
+import org.jetbrains.exposed.sql.select
+import org.jetbrains.exposed.sql.selectAll
+import org.jetbrains.exposed.sql.transactions.transaction
+import org.jetbrains.exposed.sql.update
+
+fun createCategory(name: String) {
+    transaction {
+        val count = CategoryTable.selectAll().count()
+        if (CategoryTable.select { CategoryTable.name eq name }.firstOrNull() == null)
+            CategoryTable.insert {
+                it[CategoryTable.name] = name
+                it[CategoryTable.order] = count.toInt() + 1
+            }
+    }
+}
+
+fun updateCategory(categoryId: Int, name: String?, isLanding: Boolean?) {
+    transaction {
+        CategoryTable.update({ CategoryTable.id eq categoryId }) {
+            if (name != null) it[CategoryTable.name] = name
+            if (isLanding != null) it[CategoryTable.isLanding] = isLanding
+        }
+    }
+}
+
+fun reorderCategory(categoryId: Int, from: Int, to: Int) {
+    transaction {
+        val categories = CategoryTable.selectAll().orderBy(CategoryTable.order to SortOrder.ASC).toMutableList()
+        categories.add(to - 1, categories.removeAt(from - 1))
+        categories.forEachIndexed { index, cat ->
+            CategoryTable.update({ CategoryTable.id eq cat[CategoryTable.id].value }) {
+                it[CategoryTable.order] = index + 1
+            }
+        }
+    }
+}
+
+fun removeCategory(categoryId: Int) {
+    transaction {
+        CategoryMangaTable.select { CategoryMangaTable.category eq categoryId }.forEach {
+            removeMangaFromCategory(it[CategoryMangaTable.manga].value, categoryId)
+        }
+        CategoryTable.deleteWhere { CategoryTable.id eq categoryId }
+    }
+}
+
+fun getCategoryList(): List<CategoryDataClass> {
+    return transaction {
+        CategoryTable.selectAll().orderBy(CategoryTable.order to SortOrder.ASC).map {
+            CategoryTable.toDataClass(it)
+        }
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/impl/CategoryManga.kt

@@ -0,0 +1,64 @@
+package ir.armor.tachidesk.impl
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import ir.armor.tachidesk.database.dataclass.CategoryDataClass
+import ir.armor.tachidesk.database.dataclass.MangaDataClass
+import ir.armor.tachidesk.database.table.CategoryMangaTable
+import ir.armor.tachidesk.database.table.CategoryTable
+import ir.armor.tachidesk.database.table.MangaTable
+import ir.armor.tachidesk.database.table.toDataClass
+import org.jetbrains.exposed.sql.SortOrder
+import org.jetbrains.exposed.sql.and
+import org.jetbrains.exposed.sql.deleteWhere
+import org.jetbrains.exposed.sql.insert
+import org.jetbrains.exposed.sql.select
+import org.jetbrains.exposed.sql.transactions.transaction
+import org.jetbrains.exposed.sql.update
+
+fun addMangaToCategory(mangaId: Int, categoryId: Int) {
+    transaction {
+        if (CategoryMangaTable.select { (CategoryMangaTable.category eq categoryId) and (CategoryMangaTable.manga eq mangaId) }.firstOrNull() == null) {
+            CategoryMangaTable.insert {
+                it[CategoryMangaTable.category] = categoryId
+                it[CategoryMangaTable.manga] = mangaId
+            }
+
+            MangaTable.update({ MangaTable.id eq mangaId }) {
+                it[MangaTable.defaultCategory] = false
+            }
+        }
+    }
+}
+
+fun removeMangaFromCategory(mangaId: Int, categoryId: Int) {
+    transaction {
+        CategoryMangaTable.deleteWhere { (CategoryMangaTable.category eq categoryId) and (CategoryMangaTable.manga eq mangaId) }
+        if (CategoryMangaTable.select { CategoryMangaTable.manga eq mangaId }.count() == 0L) {
+            MangaTable.update({ MangaTable.id eq mangaId }) {
+                it[MangaTable.defaultCategory] = true
+            }
+        }
+    }
+}
+
+fun getCategoryMangaList(categoryId: Int): List<MangaDataClass> {
+    return transaction {
+        CategoryMangaTable.innerJoin(MangaTable).select { CategoryMangaTable.category eq categoryId }.map {
+            MangaTable.toDataClass(it)
+        }
+    }
+}
+
+fun getMangaCategories(mangaId: Int): List<CategoryDataClass> {
+    return transaction {
+        CategoryMangaTable.innerJoin(CategoryTable).select { CategoryMangaTable.manga eq mangaId }.orderBy(CategoryTable.order to SortOrder.ASC).map {
+            CategoryTable.toDataClass(it)
+        }
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/impl/Chapter.kt

@@ -1,6 +1,9 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -14,11 +17,13 @@ import org.jetbrains.exposed.sql.and
 import org.jetbrains.exposed.sql.insert
 import org.jetbrains.exposed.sql.insertAndGetId
 import org.jetbrains.exposed.sql.select
+import org.jetbrains.exposed.sql.selectAll
 import org.jetbrains.exposed.sql.transactions.transaction
+import org.jetbrains.exposed.sql.update
 
 fun getChapterList(mangaId: Int): List<ChapterDataClass> {
     val mangaDetails = getManga(mangaId)
-    val source = getHttpSource(mangaDetails.sourceId)
+    val source = getHttpSource(mangaDetails.sourceId.toLong())
 
     val chapterList = source.fetchChapterList(
         SManga.create().apply {
@@ -27,8 +32,10 @@ fun getChapterList(mangaId: Int): List<ChapterDataClass> {
         }
     ).toBlocking().first()
 
+    val chapterCount = chapterList.count()
+
     return transaction {
-        chapterList.forEach { fetchedChapter ->
+        chapterList.reversed().forEachIndexed { index, fetchedChapter ->
             val chapterEntry = ChapterTable.select { ChapterTable.url eq fetchedChapter.url }.firstOrNull()
             if (chapterEntry == null) {
                 ChapterTable.insertAndGetId {
@@ -38,12 +45,29 @@ fun getChapterList(mangaId: Int): List<ChapterDataClass> {
                     it[chapter_number] = fetchedChapter.chapter_number
                     it[scanlator] = fetchedChapter.scanlator
 
+                    it[chapterIndex] = index + 1
+                    it[manga] = mangaId
+                }
+            } else {
+                ChapterTable.update({ ChapterTable.url eq fetchedChapter.url }) {
+                    it[name] = fetchedChapter.name
+                    it[date_upload] = fetchedChapter.date_upload
+                    it[chapter_number] = fetchedChapter.chapter_number
+                    it[scanlator] = fetchedChapter.scanlator
+
+                    it[chapterIndex] = index + 1
                     it[manga] = mangaId
                 }
             }
         }
 
-        return@transaction chapterList.map {
+        // clear any orphaned chapters
+        val dbChapterCount = transaction { ChapterTable.selectAll().count() }
+        if (dbChapterCount > chapterCount) { // we got some clean up due
+            // TODO
+        }
+
+        return@transaction chapterList.mapIndexed { index, it ->
             ChapterDataClass(
                 ChapterTable.select { ChapterTable.url eq it.url }.firstOrNull()!![ChapterTable.id].value,
                 it.url,
@@ -51,18 +75,21 @@ fun getChapterList(mangaId: Int): List<ChapterDataClass> {
                 it.date_upload,
                 it.chapter_number,
                 it.scanlator,
-                mangaId
+                mangaId,
+                chapterCount - index,
+                chapterCount
             )
         }
     }
 }
 
-fun getChapter(chapterId: Int, mangaId: Int): ChapterDataClass {
+fun getChapter(chapterIndex: Int, mangaId: Int): ChapterDataClass {
     return transaction {
-        val chapterEntry = ChapterTable.select { ChapterTable.id eq chapterId }.firstOrNull()!!
+        val chapterEntry = ChapterTable.select {
-        assert(mangaId == chapterEntry[ChapterTable.manga].value) // sanity check
+            ChapterTable.chapterIndex eq chapterIndex and (ChapterTable.manga eq mangaId)
+        }.firstOrNull()!!
         val mangaEntry = MangaTable.select { MangaTable.id eq mangaId }.firstOrNull()!!
-        val source = getHttpSource(mangaEntry[MangaTable.sourceReference].value)
+        val source = getHttpSource(mangaEntry[MangaTable.sourceReference])
 
         val pageList = source.fetchPageList(
             SChapter.create().apply {
@@ -71,14 +98,20 @@ fun getChapter(chapterId: Int, mangaId: Int): ChapterDataClass {
             }
         ).toBlocking().first()
 
+        val chapterId = chapterEntry[ChapterTable.id].value
+        val chapterCount = transaction { ChapterTable.selectAll().count() }
+
         val chapter = ChapterDataClass(
-            chapterEntry[ChapterTable.id].value,
+            chapterId,
             chapterEntry[ChapterTable.url],
             chapterEntry[ChapterTable.name],
             chapterEntry[ChapterTable.date_upload],
             chapterEntry[ChapterTable.chapter_number],
             chapterEntry[ChapterTable.scanlator],
             mangaId,
+            chapterEntry[ChapterTable.chapterIndex],
+            chapterCount.toInt(),
+
             pageList.count()
         )
 
@@ -93,6 +126,13 @@ fun getChapter(chapterId: Int, mangaId: Int): ChapterDataClass {
                         it[this.chapter] = chapterId
                     }
                 }
+            } else {
+                transaction {
+                    PageTable.update({ (PageTable.chapter eq chapterId) and (PageTable.index eq page.index) }) {
+                        it[url] = page.url
+                        it[imageUrl] = page.imageUrl
+                    }
+                }
             }
         }
 

server/src/main/kotlin/ir/armor/tachidesk/impl/Extension.kt

@@ -1,19 +1,26 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
-import com.googlecode.dex2jar.tools.Dex2jarCmd
+import com.googlecode.d2j.dex.Dex2jar
+import com.googlecode.d2j.reader.MultiDexFileReader
+import com.googlecode.dex2jar.tools.BaksmaliBaseDexExceptionHandler
 import eu.kanade.tachiyomi.extension.api.ExtensionGithubApi
+import eu.kanade.tachiyomi.network.GET
 import eu.kanade.tachiyomi.network.NetworkHelper
 import eu.kanade.tachiyomi.source.SourceFactory
 import eu.kanade.tachiyomi.source.online.HttpSource
-import ir.armor.tachidesk.APKExtractor
+import ir.armor.tachidesk.database.table.ExtensionTable
-import ir.armor.tachidesk.Config
-import ir.armor.tachidesk.database.table.ExtensionsTable
 import ir.armor.tachidesk.database.table.SourceTable
+import ir.armor.tachidesk.impl.util.APKExtractor
+import ir.armor.tachidesk.server.applicationDirs
 import kotlinx.coroutines.runBlocking
+import mu.KotlinLogging
 import okhttp3.Request
 import okio.buffer
 import okio.sink
@@ -24,16 +31,54 @@ import org.jetbrains.exposed.sql.transactions.transaction
 import org.jetbrains.exposed.sql.update
 import uy.kohesive.injekt.injectLazy
 import java.io.File
+import java.io.InputStream
 import java.net.URL
 import java.net.URLClassLoader
+import java.nio.file.Files
+import java.nio.file.Path
+
+private val logger = KotlinLogging.logger {}
+
+private fun dex2jar(dexFile: String, jarFile: String, fileNameWithoutType: String) {
+    // adopted from com.googlecode.dex2jar.tools.Dex2jarCmd.doCommandLine
+    // source at: https://github.com/DexPatcher/dex2jar/tree/v2.1-20190905-lanchon/dex-tools/src/main/java/com/googlecode/dex2jar/tools/Dex2jarCmd.java
+
+    val jarFilePath = File(jarFile).toPath()
+    val reader = MultiDexFileReader.open(Files.readAllBytes(File(dexFile).toPath()))
+    val handler = BaksmaliBaseDexExceptionHandler()
+    Dex2jar
+        .from(reader)
+        .withExceptionHandler(handler)
+        .reUseReg(false)
+        .topoLogicalSort()
+        .skipDebug(true)
+        .optimizeSynchronized(false)
+        .printIR(false)
+        .noCode(false)
+        .skipExceptions(false)
+        .to(jarFilePath)
+    if (handler.hasException()) {
+        val errorFile: Path = File(applicationDirs.extensionsRoot).toPath().resolve("$fileNameWithoutType-error.txt")
+        logger.error(
+            "Detail Error Information in File $errorFile\n" +
+                "Please report this file to one of following link if possible (any one).\n" +
+                "    https://sourceforge.net/p/dex2jar/tickets/\n" +
+                "    https://bitbucket.org/pxb1988/dex2jar/issues\n" +
+                "    https://github.com/pxb1988/dex2jar/issues\n" +
+                "    dex2jar@googlegroups.com"
+        )
+        handler.dump(errorFile, emptyArray<String>())
+    }
+}
 
 fun installAPK(apkName: String): Int {
+    logger.debug("Installing $apkName")
     val extensionRecord = getExtensionList(true).first { it.apkName == apkName }
     val fileNameWithoutType = apkName.substringBefore(".apk")
-    val dirPathWithoutType = "${Config.extensionsRoot}/$fileNameWithoutType"
+    val dirPathWithoutType = "${applicationDirs.extensionsRoot}/$fileNameWithoutType"
 
     // check if we don't have the dex file already downloaded
-    val jarPath = "${Config.extensionsRoot}/$fileNameWithoutType.jar"
+    val jarPath = "${applicationDirs.extensionsRoot}/$fileNameWithoutType.jar"
     if (!File(jarPath).exists()) {
         runBlocking {
             val api = ExtensionGithubApi()
@@ -47,9 +92,9 @@ fun installAPK(apkName: String): Int {
             downloadAPKFile(apkToDownload, apkFilePath)
 
             val className: String = APKExtractor.extract_dex_and_read_className(apkFilePath, dexFilePath)
-            println(className)
+            logger.debug(className)
             // dex -> jar
-            Dex2jarCmd.main(dexFilePath, "-o", jarFilePath, "--force")
+            dex2jar(dexFilePath, jarFilePath, fileNameWithoutType)
 
             // clean up
             File(apkFilePath).delete()
@@ -61,17 +106,12 @@ fun installAPK(apkName: String): Int {
             val instance = classToLoad.newInstance()
 
             val extensionId = transaction {
-                return@transaction ExtensionsTable.select { ExtensionsTable.name eq extensionRecord.name }.first()[ExtensionsTable.id]
+                return@transaction ExtensionTable.select { ExtensionTable.name eq extensionRecord.name }.first()[ExtensionTable.id]
             }
 
             if (instance is HttpSource) { // single source
                 val httpSource = instance as HttpSource
                 transaction {
-//                            SourceEntity.new  {
-//                                sourceId = httpSource.id
-//                                name = httpSource.name
-//                                this.extension =  ExtensionEntity.find { ExtensionsTable.name eq extension.name }.first().id
-//                            }
                     if (SourceTable.select { SourceTable.id eq httpSource.id }.count() == 0L) {
                         SourceTable.insert {
                             it[this.id] = httpSource.id
@@ -80,9 +120,7 @@ fun installAPK(apkName: String): Int {
                             it[extension] = extensionId
                         }
                     }
-//                            println(httpSource.id)
+                    logger.debug("Installed source ${httpSource.name} with id ${httpSource.id}")
-//                            println(httpSource.name)
-//                            println()
                 }
             } else { // multi source
                 val sourceFactory = instance as SourceFactory
@@ -99,16 +137,14 @@ fun installAPK(apkName: String): Int {
                                 it[positionInFactorySource] = index
                             }
                         }
-//                                println(httpSource.id)
+                        logger.debug("Installed source ${httpSource.name} with id:${httpSource.id}")
-//                                println(httpSource.name)
-//                                println()
                     }
                 }
             }
 
             // update extension info
             transaction {
-                ExtensionsTable.update({ ExtensionsTable.name eq extensionRecord.name }) {
+                ExtensionTable.update({ ExtensionTable.name eq extensionRecord.name }) {
                     it[installed] = true
                     it[classFQName] = className
                 }
@@ -132,16 +168,18 @@ private fun downloadAPKFile(url: String, apkPath: String) {
     sink.close()
 }
 
-fun removeExtension(pkgName: String) {
+fun removeExtension(apkName: String) {
-    val extensionRecord = getExtensionList(true).first { it.apkName == pkgName }
+    logger.debug("Uninstalling $apkName")
-    val fileNameWithoutType = pkgName.substringBefore(".apk")
+
-    val jarPath = "${Config.extensionsRoot}/$fileNameWithoutType.jar"
+    val extensionRecord = getExtensionList(true).first { it.apkName == apkName }
+    val fileNameWithoutType = apkName.substringBefore(".apk")
+    val jarPath = "${applicationDirs.extensionsRoot}/$fileNameWithoutType.jar"
     transaction {
-        val extensionId = ExtensionsTable.select { ExtensionsTable.name eq extensionRecord.name }.first()[ExtensionsTable.id]
+        val extensionId = ExtensionTable.select { ExtensionTable.name eq extensionRecord.name }.first()[ExtensionTable.id]
 
         SourceTable.deleteWhere { SourceTable.extension eq extensionId }
-        ExtensionsTable.update({ ExtensionsTable.name eq extensionRecord.name }) {
+        ExtensionTable.update({ ExtensionTable.name eq extensionRecord.name }) {
-            it[ExtensionsTable.installed] = false
+            it[ExtensionTable.installed] = false
         }
     }
 
@@ -149,3 +187,21 @@ fun removeExtension(pkgName: String) {
         File(jarPath).delete()
     }
 }
+
+val network: NetworkHelper by injectLazy()
+
+fun getExtensionIcon(apkName: String): Pair<InputStream, String> {
+    val iconUrl = transaction { ExtensionTable.select { ExtensionTable.apkName eq apkName }.firstOrNull()!! }[ExtensionTable.iconUrl]
+
+    val saveDir = "${applicationDirs.extensionsRoot}/icon"
+
+    return getCachedImageResponse(saveDir, apkName) {
+        network.client.newCall(
+            GET(iconUrl)
+        ).execute()
+    }
+}
+
+fun getExtensionIconUrl(apkName: String): String {
+    return "/api/v1/extension/icon/$apkName"
+}

server/src/main/kotlin/ir/armor/tachidesk/impl/ExtensionsList.kt

@@ -1,35 +1,40 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import eu.kanade.tachiyomi.extension.api.ExtensionGithubApi
 import eu.kanade.tachiyomi.extension.model.Extension
 import ir.armor.tachidesk.database.dataclass.ExtensionDataClass
-import ir.armor.tachidesk.database.table.ExtensionsTable
+import ir.armor.tachidesk.database.table.ExtensionTable
 import kotlinx.coroutines.runBlocking
-import org.jetbrains.exposed.sql.SqlExpressionBuilder.eq
+import mu.KotlinLogging
 import org.jetbrains.exposed.sql.insert
 import org.jetbrains.exposed.sql.select
 import org.jetbrains.exposed.sql.selectAll
 import org.jetbrains.exposed.sql.transactions.transaction
 import org.jetbrains.exposed.sql.update
 
+private val logger = KotlinLogging.logger {}
+
 private object Data {
     var lastExtensionCheck: Long = 0
 }
 
 private fun extensionDatabaseIsEmtpy(): Boolean {
     return transaction {
-        return@transaction ExtensionsTable.selectAll().count() == 0L
+        return@transaction ExtensionTable.selectAll().count() == 0L
     }
 }
 
 fun getExtensionList(offline: Boolean = false): List<ExtensionDataClass> {
     // update if 60 seconds has passed or requested offline and database is empty
     if (Data.lastExtensionCheck + 60 * 1000 < System.currentTimeMillis() || (offline && extensionDatabaseIsEmtpy())) {
-        println("Getting extensions list from the internet")
+        logger.debug("Getting extensions list from the internet")
         Data.lastExtensionCheck = System.currentTimeMillis()
         var foundExtensions: List<Extension.Available>
         runBlocking {
@@ -37,10 +42,10 @@ fun getExtensionList(offline: Boolean = false): List<ExtensionDataClass> {
             foundExtensions = api.findExtensions()
             transaction {
                 foundExtensions.forEach { foundExtension ->
-                    val extensionRecord = ExtensionsTable.select { ExtensionsTable.name eq foundExtension.name }.firstOrNull()
+                    val extensionRecord = ExtensionTable.select { ExtensionTable.name eq foundExtension.name }.firstOrNull()
                     if (extensionRecord != null) {
                         // update the record
-                        ExtensionsTable.update({ ExtensionsTable.name eq foundExtension.name }) {
+                        ExtensionTable.update({ ExtensionTable.name eq foundExtension.name }) {
                             it[name] = foundExtension.name
                             it[pkgName] = foundExtension.pkgName
                             it[versionName] = foundExtension.versionName
@@ -52,7 +57,7 @@ fun getExtensionList(offline: Boolean = false): List<ExtensionDataClass> {
                         }
                     } else {
                         // insert new record
-                        ExtensionsTable.insert {
+                        ExtensionTable.insert {
                             it[name] = foundExtension.name
                             it[pkgName] = foundExtension.pkgName
                             it[versionName] = foundExtension.versionName
@@ -66,21 +71,23 @@ fun getExtensionList(offline: Boolean = false): List<ExtensionDataClass> {
                 }
             }
         }
+    } else {
+        logger.debug("used cached extension list")
     }
 
     return transaction {
-        return@transaction ExtensionsTable.selectAll().map {
+        return@transaction ExtensionTable.selectAll().map {
             ExtensionDataClass(
-                it[ExtensionsTable.name],
+                it[ExtensionTable.name],
-                it[ExtensionsTable.pkgName],
+                it[ExtensionTable.pkgName],
-                it[ExtensionsTable.versionName],
+                it[ExtensionTable.versionName],
-                it[ExtensionsTable.versionCode],
+                it[ExtensionTable.versionCode],
-                it[ExtensionsTable.lang],
+                it[ExtensionTable.lang],
-                it[ExtensionsTable.isNsfw],
+                it[ExtensionTable.isNsfw],
-                it[ExtensionsTable.apkName],
+                it[ExtensionTable.apkName],
-                it[ExtensionsTable.iconUrl],
+                getExtensionIconUrl(it[ExtensionTable.apkName]),
-                it[ExtensionsTable.installed],
+                it[ExtensionTable.installed],
-                it[ExtensionsTable.classFQName]
+                it[ExtensionTable.classFQName]
             )
         }
     }

server/src/main/kotlin/ir/armor/tachidesk/impl/Library.kt

@@ -0,0 +1,50 @@
+package ir.armor.tachidesk.impl
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import ir.armor.tachidesk.database.dataclass.MangaDataClass
+import ir.armor.tachidesk.database.table.CategoryMangaTable
+import ir.armor.tachidesk.database.table.MangaTable
+import ir.armor.tachidesk.database.table.toDataClass
+import org.jetbrains.exposed.sql.and
+import org.jetbrains.exposed.sql.deleteWhere
+import org.jetbrains.exposed.sql.select
+import org.jetbrains.exposed.sql.transactions.transaction
+import org.jetbrains.exposed.sql.update
+
+fun addMangaToLibrary(mangaId: Int) {
+    val manga = getManga(mangaId)
+    if (!manga.inLibrary) {
+        transaction {
+            MangaTable.update({ MangaTable.id eq manga.id }) {
+                it[inLibrary] = true
+            }
+        }
+    }
+}
+
+fun removeMangaFromLibrary(mangaId: Int) {
+    val manga = getManga(mangaId)
+    if (manga.inLibrary) {
+        transaction {
+            MangaTable.update({ MangaTable.id eq manga.id }) {
+                it[inLibrary] = false
+                it[defaultCategory] = true
+            }
+            CategoryMangaTable.deleteWhere { CategoryMangaTable.manga eq mangaId }
+        }
+    }
+}
+
+fun getLibraryMangas(): List<MangaDataClass> {
+    return transaction {
+        MangaTable.select { (MangaTable.inLibrary eq true) and (MangaTable.defaultCategory eq true) }.map {
+            MangaTable.toDataClass(it)
+        }
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/impl/Manga.kt

@@ -1,20 +1,21 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import eu.kanade.tachiyomi.network.GET
 import eu.kanade.tachiyomi.source.model.SManga
-import ir.armor.tachidesk.Config
 import ir.armor.tachidesk.database.dataclass.MangaDataClass
 import ir.armor.tachidesk.database.table.MangaStatus
 import ir.armor.tachidesk.database.table.MangaTable
-import ir.armor.tachidesk.database.table.SourceTable
+import ir.armor.tachidesk.server.applicationDirs
 import org.jetbrains.exposed.sql.select
 import org.jetbrains.exposed.sql.transactions.transaction
 import org.jetbrains.exposed.sql.update
-import java.io.File
 import java.io.InputStream
 
 fun getManga(mangaId: Int, proxyThumbnail: Boolean = true): MangaDataClass {
@@ -23,7 +24,7 @@ fun getManga(mangaId: Int, proxyThumbnail: Boolean = true): MangaDataClass {
     return if (mangaEntry[MangaTable.initialized]) {
         MangaDataClass(
             mangaId,
-            mangaEntry[MangaTable.sourceReference].value,
+            mangaEntry[MangaTable.sourceReference].toString(),
 
             mangaEntry[MangaTable.url],
             mangaEntry[MangaTable.title],
@@ -36,9 +37,11 @@ fun getManga(mangaId: Int, proxyThumbnail: Boolean = true): MangaDataClass {
             mangaEntry[MangaTable.description],
             mangaEntry[MangaTable.genre],
             MangaStatus.valueOf(mangaEntry[MangaTable.status]).name,
+            mangaEntry[MangaTable.inLibrary],
+            getSource(mangaEntry[MangaTable.sourceReference])
         )
     } else { // initialize manga
-        val source = getHttpSource(mangaEntry[MangaTable.sourceReference].value)
+        val source = getHttpSource(mangaEntry[MangaTable.sourceReference])
         val fetchedManga = source.fetchMangaDetails(
             SManga.create().apply {
                 url = mangaEntry[MangaTable.url]
@@ -66,7 +69,7 @@ fun getManga(mangaId: Int, proxyThumbnail: Boolean = true): MangaDataClass {
 
         MangaDataClass(
             mangaId,
-            mangaEntry[MangaTable.sourceReference].value,
+            mangaEntry[MangaTable.sourceReference].toString(),
 
             mangaEntry[MangaTable.url],
             mangaEntry[MangaTable.title],
@@ -79,60 +82,27 @@ fun getManga(mangaId: Int, proxyThumbnail: Boolean = true): MangaDataClass {
             fetchedManga.description,
             fetchedManga.genre,
             MangaStatus.valueOf(fetchedManga.status).name,
+            false,
+            getSource(mangaEntry[MangaTable.sourceReference])
         )
     }
 }
 
 fun getThumbnail(mangaId: Int): Pair<InputStream, String> {
     val mangaEntry = transaction { MangaTable.select { MangaTable.id eq mangaId }.firstOrNull()!! }
-    var filePath = "${Config.thumbnailsRoot}/$mangaId."
+    val saveDir = applicationDirs.thumbnailsRoot
+    val fileName = mangaId.toString()
 
-    val potentialCache = findFileNameStartingWith(Config.thumbnailsRoot, mangaId.toString())
+    return getCachedImageResponse(saveDir, fileName) {
-    if (potentialCache != null) {
+        val sourceId = mangaEntry[MangaTable.sourceReference]
-        println("using cached thumbnail file")
+        val source = getHttpSource(sourceId)
-        return Pair(
+        var thumbnailUrl = mangaEntry[MangaTable.thumbnail_url]
-            pathToInputStream(potentialCache),
+        if (thumbnailUrl == null || thumbnailUrl.isEmpty()) {
-            "image/${potentialCache.substringAfter(filePath)}"
+            thumbnailUrl = getManga(mangaId, proxyThumbnail = false).thumbnailUrl!!
-        )
+        }
-    }
 
-    val sourceId = mangaEntry[MangaTable.sourceReference].value
+        source.client.newCall(
-    println("getting source for $mangaId")
+            GET(thumbnailUrl, source.headers)
-    val source = getHttpSource(sourceId)
+        ).execute()
-    var thumbnailUrl = mangaEntry[MangaTable.thumbnail_url]
-    if (thumbnailUrl == null || thumbnailUrl.isEmpty()) {
-        thumbnailUrl = getManga(mangaId, proxyThumbnail = false).thumbnailUrl!!
-    }
-    println(thumbnailUrl)
-    val response = source.client.newCall(
-        GET(thumbnailUrl, source.headers)
-    ).execute()
-
-    if (response.code == 200) {
-        val contentType = response.headers["content-type"]!!
-        filePath += contentType.substringAfter("image/")
-
-        writeStream(response.body!!.byteStream(), filePath)
-
-        return Pair(
-            pathToInputStream(filePath),
-            contentType
-        )
-    } else {
-        throw Exception("request error! ${response.code}")
     }
 }
-
-fun getMangaDir(mangaId: Int): String {
-    val mangaEntry = transaction { MangaTable.select { MangaTable.id eq mangaId }.firstOrNull()!! }
-    val sourceId = mangaEntry[MangaTable.sourceReference].value
-    val sourceEntry = transaction { SourceTable.select { SourceTable.id eq sourceId }.firstOrNull()!! }
-
-    val mangaTitle = mangaEntry[MangaTable.title]
-    val sourceName = sourceEntry[SourceTable.name]
-
-    val mangaDir = "${Config.mangaRoot}/$sourceName/$mangaTitle"
-    // make sure dirs exist
-    File(mangaDir).mkdirs()
-    return mangaDir
-}

server/src/main/kotlin/ir/armor/tachidesk/impl/MangaDexHelper.kt

@@ -1,6 +1,9 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 

server/src/main/kotlin/ir/armor/tachidesk/impl/MangaList.kt

@@ -1,6 +1,9 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -14,7 +17,7 @@ import org.jetbrains.exposed.sql.select
 import org.jetbrains.exposed.sql.transactions.transaction
 
 fun proxyThumbnailUrl(mangaId: Int): String {
-    return "http://127.0.0.1:4567/api/v1/manga/$mangaId/thumbnail"
+    return "/api/v1/manga/$mangaId/thumbnail"
 }
 
 fun getMangaList(sourceId: Long, pageNum: Int = 1, popular: Boolean): PagedMangaListDataClass {
@@ -52,7 +55,7 @@ fun MangasPage.processEntries(sourceId: Long): PagedMangaListDataClass {
 
                 MangaDataClass(
                     mangaId,
-                    sourceId,
+                    sourceId.toString(),
 
                     manga.url,
                     manga.title,
@@ -64,13 +67,13 @@ fun MangasPage.processEntries(sourceId: Long): PagedMangaListDataClass {
                     manga.author,
                     manga.description,
                     manga.genre,
-                    MangaStatus.valueOf(manga.status).name,
+                    MangaStatus.valueOf(manga.status).name
                 )
             } else {
                 val mangaId = mangaEntry[MangaTable.id].value
                 MangaDataClass(
                     mangaId,
-                    sourceId,
+                    sourceId.toString(),
 
                     manga.url,
                     manga.title,
@@ -83,6 +86,7 @@ fun MangasPage.processEntries(sourceId: Long): PagedMangaListDataClass {
                     mangaEntry[MangaTable.description],
                     mangaEntry[MangaTable.genre],
                     MangaStatus.valueOf(mangaEntry[MangaTable.status]).name,
+                    mangaEntry[MangaTable.inLibrary]
                 )
             }
         }

server/src/main/kotlin/ir/armor/tachidesk/impl/Page.kt

@@ -1,6 +1,9 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -9,14 +12,14 @@ import eu.kanade.tachiyomi.source.online.HttpSource
 import ir.armor.tachidesk.database.table.ChapterTable
 import ir.armor.tachidesk.database.table.MangaTable
 import ir.armor.tachidesk.database.table.PageTable
+import ir.armor.tachidesk.database.table.SourceTable
+import ir.armor.tachidesk.server.applicationDirs
 import org.jetbrains.exposed.sql.and
 import org.jetbrains.exposed.sql.select
 import org.jetbrains.exposed.sql.transactions.transaction
 import org.jetbrains.exposed.sql.update
 import java.io.File
 import java.io.InputStream
-import java.nio.file.Files
-import java.nio.file.Paths
 
 fun getTrueImageUrl(page: Page, source: HttpSource): String {
     if (page.imageUrl == null) {
@@ -25,10 +28,16 @@ fun getTrueImageUrl(page: Page, source: HttpSource): String {
     return page.imageUrl!!
 }
 
-fun getPageImage(mangaId: Int, chapterId: Int, index: Int): Pair<InputStream, String> {
+fun getPageImage(mangaId: Int, chapterIndex: Int, index: Int): Pair<InputStream, String> {
     val mangaEntry = transaction { MangaTable.select { MangaTable.id eq mangaId }.firstOrNull()!! }
-    val source = getHttpSource(mangaEntry[MangaTable.sourceReference].value)
+    val source = getHttpSource(mangaEntry[MangaTable.sourceReference])
-    val chapterEntry = transaction { ChapterTable.select { ChapterTable.id eq chapterId }.firstOrNull()!! }
+    val chapterEntry = transaction {
+        ChapterTable.select {
+            (ChapterTable.chapterIndex eq chapterIndex) and (ChapterTable.manga eq mangaId)
+        }.firstOrNull()!!
+    }
+    val chapterId = chapterEntry[ChapterTable.id].value
+
     val pageEntry = transaction { PageTable.select { (PageTable.chapter eq chapterId) and (PageTable.index eq index) }.firstOrNull()!! }
 
     val tachiPage = Page(
@@ -45,37 +54,32 @@ fun getPageImage(mangaId: Int, chapterId: Int, index: Int): Pair<InputStream, St
         }
     }
 
-    val saveDir = getMangaDir(mangaId) + "/" + chapterEntry[ChapterTable.chapter_number]
+    val saveDir = getChapterDir(mangaId, chapterId)
     File(saveDir).mkdirs()
-    var filePath = "$saveDir/$index."
+    val fileName = index.toString()
 
-    val potentialCache = findFileNameStartingWith(saveDir, index.toString())
+    return getCachedImageResponse(saveDir, fileName) {
-    if (potentialCache != null) {
+        source.fetchImage(tachiPage).toBlocking().first()
-        println("using cached page file for $index")
-        return Pair(
-            pathToInputStream(potentialCache),
-            "image/${potentialCache.substringAfter("$filePath")}"
-        )
-    }
-
-    val response = source.fetchImage(tachiPage).toBlocking().first()
-
-    if (response.code == 200) {
-        val contentType = response.headers["content-type"]!!
-        filePath += contentType.substringAfter("image/")
-
-        Files.newOutputStream(Paths.get(filePath)).use { os ->
-
-            response.body!!.source().saveTo(os)
-        }
-
-//        writeStream(response.body!!.source(), filePath)
-
-        return Pair(
-            pathToInputStream(filePath),
-            contentType
-        )
-    } else {
-        throw Exception("request error! ${response.code}")
     }
 }
+
+fun getChapterDir(mangaId: Int, chapterId: Int): String {
+    val mangaEntry = transaction { MangaTable.select { MangaTable.id eq mangaId }.firstOrNull()!! }
+    val sourceId = mangaEntry[MangaTable.sourceReference]
+    val source = getHttpSource(sourceId)
+    val sourceEntry = transaction { SourceTable.select { SourceTable.id eq sourceId }.firstOrNull()!! }
+    val chapterEntry = transaction { ChapterTable.select { ChapterTable.id eq chapterId }.firstOrNull()!! }
+
+    val chapterDir = when {
+        chapterEntry[ChapterTable.scanlator] != null -> "${chapterEntry[ChapterTable.scanlator]}_${chapterEntry[ChapterTable.name]}"
+        else -> chapterEntry[ChapterTable.name]
+    }
+
+    val mangaTitle = mangaEntry[MangaTable.title]
+    val sourceName = source.toString()
+
+    val mangaDir = "${applicationDirs.mangaRoot}/$sourceName/$mangaTitle/$chapterDir"
+    // make sure dirs exist
+    File(mangaDir).mkdirs()
+    return mangaDir
+}

server/src/main/kotlin/ir/armor/tachidesk/impl/Search.kt

@@ -1,6 +1,9 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -18,6 +21,7 @@ fun sourceSearch(sourceId: Long, searchTerm: String, pageNum: Int): PagedMangaLi
 }
 
 fun sourceGlobalSearch(searchTerm: String) {
+    // TODO
 }
 
 data class FilterWrapper(

server/src/main/kotlin/ir/armor/tachidesk/impl/SourceList.kt

@@ -1,54 +1,61 @@
-package ir.armor.tachidesk.util
+package ir.armor.tachidesk.impl
 
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import eu.kanade.tachiyomi.source.SourceFactory
 import eu.kanade.tachiyomi.source.online.HttpSource
-import ir.armor.tachidesk.Config
 import ir.armor.tachidesk.database.dataclass.SourceDataClass
 import ir.armor.tachidesk.database.entity.ExtensionEntity
 import ir.armor.tachidesk.database.entity.SourceEntity
-import ir.armor.tachidesk.database.table.ExtensionsTable
+import ir.armor.tachidesk.database.table.ExtensionTable
 import ir.armor.tachidesk.database.table.SourceTable
+import ir.armor.tachidesk.server.applicationDirs
+import mu.KotlinLogging
 import org.jetbrains.exposed.sql.select
 import org.jetbrains.exposed.sql.selectAll
 import org.jetbrains.exposed.sql.transactions.transaction
+import java.lang.NullPointerException
 import java.net.URL
 import java.net.URLClassLoader
-import java.util.Locale
+
+private val logger = KotlinLogging.logger {}
 
 private val sourceCache = mutableListOf<Pair<Long, HttpSource>>()
 private val extensionCache = mutableListOf<Pair<String, Any>>()
 
 fun getHttpSource(sourceId: Long): HttpSource {
+    val sourceRecord = transaction {
+        SourceEntity.findById(sourceId)
+    } ?: throw NullPointerException("Source with id $sourceId is not installed")
+
     val cachedResult: Pair<Long, HttpSource>? = sourceCache.firstOrNull { it.first == sourceId }
     if (cachedResult != null) {
-        println("used cached HttpSource: ${cachedResult.second.name}")
+        logger.debug("used cached HttpSource: ${cachedResult.second.name}")
         return cachedResult.second
     }
 
     val result: HttpSource = transaction {
-        val sourceRecord = SourceEntity.findById(sourceId)!!
         val extensionId = sourceRecord.extension.id.value
         val extensionRecord = ExtensionEntity.findById(extensionId)!!
         val apkName = extensionRecord.apkName
         val className = extensionRecord.classFQName
         val jarName = apkName.substringBefore(".apk") + ".jar"
-        val jarPath = "${Config.extensionsRoot}/$jarName"
+        val jarPath = "${applicationDirs.extensionsRoot}/$jarName"
-
-        println(jarName)
 
         val cachedExtensionPair = extensionCache.firstOrNull { it.first == jarPath }
         var usedCached = false
         val instance =
             if (cachedExtensionPair != null) {
                 usedCached = true
-                println("Used cached Extension")
+                logger.debug("Used cached Extension")
                 cachedExtensionPair.second
             } else {
-                println("No Extension cache")
+                logger.debug("No Extension cache")
                 val child = URLClassLoader(arrayOf<URL>(URL("file:$jarPath")), this::class.java.classLoader)
                 val classToLoad = Class.forName(className, true, child)
                 classToLoad.newInstance()
@@ -77,8 +84,8 @@ fun getSourceList(): List<SourceDataClass> {
             SourceDataClass(
                 it[SourceTable.id].value.toString(),
                 it[SourceTable.name],
-                Locale(it[SourceTable.lang]).getDisplayLanguage(Locale(it[SourceTable.lang])),
+                it[SourceTable.lang],
-                ExtensionsTable.select { ExtensionsTable.id eq it[SourceTable.extension] }.first()[ExtensionsTable.iconUrl],
+                getExtensionIconUrl(ExtensionTable.select { ExtensionTable.id eq it[SourceTable.extension] }.first()[ExtensionTable.apkName]),
                 getHttpSource(it[SourceTable.id].value).supportsLatest
             )
         }
@@ -87,14 +94,14 @@ fun getSourceList(): List<SourceDataClass> {
 
 fun getSource(sourceId: Long): SourceDataClass {
     return transaction {
-        val source = SourceTable.select { SourceTable.id eq sourceId }.firstOrNull()!!
+        val source = SourceTable.select { SourceTable.id eq sourceId }.firstOrNull()
 
         return@transaction SourceDataClass(
-            source[SourceTable.id].value.toString(),
+            sourceId.toString(),
-            source[SourceTable.name],
+            source?.get(SourceTable.name),
-            Locale(source[SourceTable.lang]).getDisplayLanguage(Locale(source[SourceTable.lang])),
+            source?.get(SourceTable.lang),
-            ExtensionsTable.select { ExtensionsTable.id eq source[SourceTable.extension] }.first()[ExtensionsTable.iconUrl],
+            source?.let { ExtensionTable.select { ExtensionTable.id eq source[SourceTable.extension] }.first()[ExtensionTable.iconUrl] },
-            getHttpSource(source[SourceTable.id].value).supportsLatest
+            source?.let { getHttpSource(sourceId).supportsLatest }
         )
     }
 }

server/src/main/kotlin/ir/armor/tachidesk/impl/util/APKExtractor.kt

@@ -0,0 +1,510 @@
+package ir.armor.tachidesk.impl.util
+
+/*
+* Copyright (C) Contributors to the Suwayomi project
+*
+* This Source Code Form is subject to the terms of the Mozilla Public
+* License, v. 2.0. If a copy of the MPL was not distributed with this
+* file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import org.w3c.dom.Document
+import org.xml.sax.InputSource
+import java.io.IOException
+import java.io.StringReader
+import java.nio.file.Files
+import java.nio.file.Paths
+import java.util.zip.ZipFile
+import javax.xml.parsers.DocumentBuilderFactory
+
+object APKExtractor {
+    // decompressXML -- Parse the 'compressed' binary form of Android XML docs
+    // such as for AndroidManifest.xml in .apk files
+    var endDocTag = 0x00100101
+    var startTag = 0x00100102
+    var endTag = 0x00100103
+    fun prt(str: String?) {
+        // System.err.print(str);
+    }
+
+    fun decompressXML(xml: ByteArray): String {
+        val finalXML = StringBuilder()
+
+        // Compressed XML file/bytes starts with 24x bytes of data,
+        // 9 32 bit words in little endian order (LSB first):
+        // 0th word is 03 00 08 00
+        // 3rd word SEEMS TO BE: Offset at then of StringTable
+        // 4th word is: Number of strings in string table
+        // WARNING: Sometime I indiscriminently display or refer to word in
+        // little endian storage format, or in integer format (ie MSB first).
+        val numbStrings = LEW(xml, 4 * 4)
+
+        // StringIndexTable starts at offset 24x, an array of 32 bit LE offsets
+        // of the length/string data in the StringTable.
+        val sitOff = 0x24 // Offset of start of StringIndexTable
+
+        // StringTable, each string is represented with a 16 bit little endian
+        // character count, followed by that number of 16 bit (LE) (Unicode)
+        // chars.
+        val stOff = sitOff + numbStrings * 4 // StringTable follows
+        // StrIndexTable
+
+        // XMLTags, The XML tag tree starts after some unknown content after the
+        // StringTable. There is some unknown data after the StringTable, scan
+        // forward from this point to the flag for the start of an XML start
+        // tag.
+        var xmlTagOff = LEW(xml, 3 * 4) // Start from the offset in the 3rd
+        // word.
+        // Scan forward until we find the bytes: 0x02011000(x00100102 in normal
+        // int)
+        var ii = xmlTagOff
+        while (ii < xml.size - 4) {
+            if (LEW(xml, ii) == startTag) {
+                xmlTagOff = ii
+                break
+            }
+            ii += 4
+        }
+
+        // XML tags and attributes:
+        // Every XML start and end tag consists of 6 32 bit words:
+        // 0th word: 02011000 for startTag and 03011000 for endTag
+        // 1st word: a flag?, like 38000000
+        // 2nd word: Line of where this tag appeared in the original source file
+        // 3rd word: FFFFFFFF ??
+        // 4th word: StringIndex of NameSpace name, or FFFFFFFF for default NS
+        // 5th word: StringIndex of Element Name
+        // (Note: 01011000 in 0th word means end of XML document, endDocTag)
+
+        // Start tags (not end tags) contain 3 more words:
+        // 6th word: 14001400 meaning??
+        // 7th word: Number of Attributes that follow this tag(follow word 8th)
+        // 8th word: 00000000 meaning??
+
+        // Attributes consist of 5 words:
+        // 0th word: StringIndex of Attribute Name's Namespace, or FFFFFFFF
+        // 1st word: StringIndex of Attribute Name
+        // 2nd word: StringIndex of Attribute Value, or FFFFFFF if ResourceId
+        // used
+        // 3rd word: Flags?
+        // 4th word: str ind of attr value again, or ResourceId of value
+
+        // TMP, dump string table to tr for debugging
+        // tr.addSelect("strings", null);
+        // for (int ii=0; ii<numbStrings; ii++) {
+        // // Length of string starts at StringTable plus offset in StrIndTable
+        // String str = compXmlString(xml, sitOff, stOff, ii);
+        // tr.add(String.valueOf(ii), str);
+        // }
+        // tr.parent();
+
+        // Step through the XML tree element tags and attributes
+        var off = xmlTagOff
+        var indent = 0
+        var startTagLineNo = -2
+        while (off < xml.size) {
+            val tag0 = LEW(xml, off)
+            // int tag1 = LEW(xml, off+1*4);
+            val lineNo = LEW(xml, off + 2 * 4)
+            // int tag3 = LEW(xml, off+3*4);
+            val nameNsSi = LEW(xml, off + 4 * 4)
+            val nameSi = LEW(xml, off + 5 * 4)
+            if (tag0 == startTag) { // XML START TAG
+                val tag6 = LEW(xml, off + 6 * 4) // Expected to be 14001400
+                val numbAttrs = LEW(xml, off + 7 * 4) // Number of Attributes
+                // to follow
+                // int tag8 = LEW(xml, off+8*4); // Expected to be 00000000
+                off += 9 * 4 // Skip over 6+3 words of startTag data
+                val name = compXmlString(xml, sitOff, stOff, nameSi)
+                // tr.addSelect(name, null);
+                startTagLineNo = lineNo
+
+                // Look for the Attributes
+                val sb = StringBuffer()
+                for (ii in 0 until numbAttrs) {
+                    val attrNameNsSi = LEW(xml, off) // AttrName Namespace Str
+                    // Ind, or FFFFFFFF
+                    val attrNameSi = LEW(xml, off + 1 * 4) // AttrName String
+                    // Index
+                    val attrValueSi = LEW(xml, off + 2 * 4) // AttrValue Str
+                    // Ind, or
+                    // FFFFFFFF
+                    val attrFlags = LEW(xml, off + 3 * 4)
+                    val attrResId = LEW(xml, off + 4 * 4) // AttrValue
+                    // ResourceId or dup
+                    // AttrValue StrInd
+                    off += 5 * 4 // Skip over the 5 words of an attribute
+                    val attrName = compXmlString(
+                        xml, sitOff, stOff,
+                        attrNameSi
+                    )
+                    val attrValue = if (attrValueSi != -1) compXmlString(xml, sitOff, stOff, attrValueSi)
+                    else "resourceID 0x ${Integer.toHexString(attrResId)}"
+                    sb.append(" $attrName=\"$attrValue\"")
+                    // tr.add(attrName, attrValue);
+                }
+                finalXML.append("<$name$sb>")
+                prtIndent(indent, "<$name$sb>")
+                indent++
+            } else if (tag0 == endTag) { // XML END TAG
+                indent--
+                off += 6 * 4 // Skip over 6 words of endTag data
+                val name = compXmlString(xml, sitOff, stOff, nameSi)
+                finalXML.append("</$name>")
+                prtIndent(
+                    indent,
+                    "</" + name + "> (line " + startTagLineNo +
+                        "-" + lineNo + ")"
+                )
+                // tr.parent(); // Step back up the NobTree
+            } else if (tag0 == endDocTag) { // END OF XML DOC TAG
+                break
+            } else {
+                prt(
+                    "  Unrecognized tag code '" + Integer.toHexString(tag0) +
+                        "' at offset " + off
+                )
+                break
+            }
+        } // end of while loop scanning tags and attributes of XML tree
+        // prt("    end at offset " + off);
+        return finalXML.toString()
+    } // end of decompressXML
+
+    fun compXmlString(xml: ByteArray, sitOff: Int, stOff: Int, strInd: Int): String? {
+        if (strInd < 0) return null
+        val strOff = stOff + LEW(xml, sitOff + strInd * 4)
+        return compXmlStringAt(xml, strOff)
+    }
+
+    var spaces = "                                             "
+    fun prtIndent(indent: Int, str: String) {
+        prt(spaces.substring(0, Math.min(indent * 2, spaces.length)) + str)
+    }
+
+    // compXmlStringAt -- Return the string stored in StringTable format at
+    // offset strOff. This offset points to the 16 bit string length, which
+    // is followed by that number of 16 bit (Unicode) chars.
+    fun compXmlStringAt(arr: ByteArray, strOff: Int): String {
+        val strLen: Int = arr[strOff + 1].toInt() shl 8 and 0xff00 or arr[strOff].toInt() and 0xff
+        val chars = ByteArray(strLen)
+        for (ii in 0 until strLen) {
+            chars[ii] = arr[strOff + 2 + ii * 2]
+        }
+        return String(chars) // Hack, just use 8 byte chars
+    } // end of compXmlStringAt
+
+    // LEW -- Return value of a Little Endian 32 bit word from the byte array
+    // at offset off.
+    fun LEW(arr: ByteArray, off: Int): Int {
+
+        return (arr[off + 3].toInt() shl 24) and -0x1000000 or
+            (arr[off + 2].toInt() shl 16 and 0xff0000) or
+            (arr[off + 1].toInt() shl 8 and 0xff00) or
+            (arr[off].toInt() and 0xFF)
+    } // end of LEW
+
+    @Throws(Exception::class)
+    fun loadXMLFromString(xml: String?): Document {
+        val docBuilderFactory = DocumentBuilderFactory.newInstance()
+        val docBuilder = docBuilderFactory.newDocumentBuilder()
+        return docBuilder.parse(InputSource(StringReader(xml)))
+    }
+
+    @Throws(IOException::class)
+    fun extract_dex_and_read_className(filePath: String?, dexPath: String?): String {
+        var zip: ZipFile? = null
+        zip = ZipFile(filePath)
+        val androidManifest = zip.getEntry("AndroidManifest.xml")
+        val classesDex = zip.getEntry("classes.dex")
+
+        // write dex file
+        val dexStream = zip.getInputStream(classesDex)
+        Files.newOutputStream(Paths.get(dexPath)).use { os ->
+            val buffer = ByteArray(1024)
+            var len: Int
+            while (dexStream.read(buffer).also { len = it } > 0) {
+                os.write(buffer, 0, len)
+            }
+        }
+
+        // read xml file
+        val `is` = zip.getInputStream(androidManifest)
+        val buf = ByteArray(1024000) // 100 kb
+        `is`.read(buf)
+        `is`.close()
+        zip.close()
+        val xml = decompressXML(buf)
+        try {
+            val xmlDoc = loadXMLFromString(xml)
+            val pkg = xmlDoc.documentElement.getAttribute("package")
+            val nodes = xmlDoc.getElementsByTagName("meta-data")
+            for (i in 0 until nodes.length) {
+                val attributes = nodes.item(i).attributes
+                println(attributes.getNamedItem("name").nodeValue)
+                if (attributes.getNamedItem("name").nodeValue == "tachiyomi.extension.class") return pkg + attributes.getNamedItem("value").nodeValue
+            }
+        } catch (e: Exception) {
+            e.printStackTrace()
+        }
+        return ""
+    }
+}
+
+// original Java code
+
+// package ir.armor.tachidesk.impl.util;
+//
+// /*
+// * Copyright (C) Contributors to the Suwayomi project
+// *
+// * This Source Code Form is subject to the terms of the Mozilla Public
+// * License, v. 2.0. If a copy of the MPL was not distributed with this
+// * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+//
+// import org.w3c.dom.Document;
+// import org.w3c.dom.NamedNodeMap;
+// import org.w3c.dom.NodeList;
+// import org.xml.sax.InputSource;
+//
+// import javax.xml.parsers.DocumentBuilder;
+// import javax.xml.parsers.DocumentBuilderFactory;
+// import java.io.*;
+// import java.nio.file.Files;
+// import java.nio.file.Paths;
+// import java.util.zip.ZipEntry;
+// import java.util.zip.ZipFile;
+//
+// public class APKExtractor {
+//    // decompressXML -- Parse the 'compressed' binary form of Android XML docs
+//    // such as for AndroidManifest.xml in .apk files
+//    public static int endDocTag = 0x00100101;
+//    public static int startTag = 0x00100102;
+//    public static int endTag = 0x00100103;
+//
+//    static void prt(String str) {
+//        //System.err.print(str);
+//    }
+//
+//    public static String decompressXML(byte[] xml) {
+//
+//        StringBuilder finalXML = new StringBuilder();
+//
+//        // Compressed XML file/bytes starts with 24x bytes of data,
+//        // 9 32 bit words in little endian order (LSB first):
+//        // 0th word is 03 00 08 00
+//        // 3rd word SEEMS TO BE: Offset at then of StringTable
+//        // 4th word is: Number of strings in string table
+//        // WARNING: Sometime I indiscriminently display or refer to word in
+//        // little endian storage format, or in integer format (ie MSB first).
+//        int numbStrings = LEW(xml, 4 * 4);
+//
+//        // StringIndexTable starts at offset 24x, an array of 32 bit LE offsets
+//        // of the length/string data in the StringTable.
+//        int sitOff = 0x24; // Offset of start of StringIndexTable
+//
+//        // StringTable, each string is represented with a 16 bit little endian
+//        // character count, followed by that number of 16 bit (LE) (Unicode)
+//        // chars.
+//        int stOff = sitOff + numbStrings * 4; // StringTable follows
+//        // StrIndexTable
+//
+//        // XMLTags, The XML tag tree starts after some unknown content after the
+//        // StringTable. There is some unknown data after the StringTable, scan
+//        // forward from this point to the flag for the start of an XML start
+//        // tag.
+//        int xmlTagOff = LEW(xml, 3 * 4); // Start from the offset in the 3rd
+//        // word.
+//        // Scan forward until we find the bytes: 0x02011000(x00100102 in normal
+//        // int)
+//        for (int ii = xmlTagOff; ii < xml.length - 4; ii += 4) {
+//            if (LEW(xml, ii) == startTag) {
+//                xmlTagOff = ii;
+//                break;
+//            }
+//        } // end of hack, scanning for start of first start tag
+//
+//        // XML tags and attributes:
+//        // Every XML start and end tag consists of 6 32 bit words:
+//        // 0th word: 02011000 for startTag and 03011000 for endTag
+//        // 1st word: a flag?, like 38000000
+//        // 2nd word: Line of where this tag appeared in the original source file
+//        // 3rd word: FFFFFFFF ??
+//        // 4th word: StringIndex of NameSpace name, or FFFFFFFF for default NS
+//        // 5th word: StringIndex of Element Name
+//        // (Note: 01011000 in 0th word means end of XML document, endDocTag)
+//
+//        // Start tags (not end tags) contain 3 more words:
+//        // 6th word: 14001400 meaning??
+//        // 7th word: Number of Attributes that follow this tag(follow word 8th)
+//        // 8th word: 00000000 meaning??
+//
+//        // Attributes consist of 5 words:
+//        // 0th word: StringIndex of Attribute Name's Namespace, or FFFFFFFF
+//        // 1st word: StringIndex of Attribute Name
+//        // 2nd word: StringIndex of Attribute Value, or FFFFFFF if ResourceId
+//        // used
+//        // 3rd word: Flags?
+//        // 4th word: str ind of attr value again, or ResourceId of value
+//
+//        // TMP, dump string table to tr for debugging
+//        // tr.addSelect("strings", null);
+//        // for (int ii=0; ii<numbStrings; ii++) {
+//        // // Length of string starts at StringTable plus offset in StrIndTable
+//        // String str = compXmlString(xml, sitOff, stOff, ii);
+//        // tr.add(String.valueOf(ii), str);
+//        // }
+//        // tr.parent();
+//
+//        // Step through the XML tree element tags and attributes
+//        int off = xmlTagOff;
+//        int indent = 0;
+//        int startTagLineNo = -2;
+//        while (off < xml.length) {
+//            int tag0 = LEW(xml, off);
+//            // int tag1 = LEW(xml, off+1*4);
+//            int lineNo = LEW(xml, off + 2 * 4);
+//            // int tag3 = LEW(xml, off+3*4);
+//            int nameNsSi = LEW(xml, off + 4 * 4);
+//            int nameSi = LEW(xml, off + 5 * 4);
+//
+//            if (tag0 == startTag) { // XML START TAG
+//                int tag6 = LEW(xml, off + 6 * 4); // Expected to be 14001400
+//                int numbAttrs = LEW(xml, off + 7 * 4); // Number of Attributes
+//                // to follow
+//                // int tag8 = LEW(xml, off+8*4); // Expected to be 00000000
+//                off += 9 * 4; // Skip over 6+3 words of startTag data
+//                String name = compXmlString(xml, sitOff, stOff, nameSi);
+//                // tr.addSelect(name, null);
+//                startTagLineNo = lineNo;
+//
+//                // Look for the Attributes
+//                StringBuffer sb = new StringBuffer();
+//                for (int ii = 0; ii < numbAttrs; ii++) {
+//                    int attrNameNsSi = LEW(xml, off); // AttrName Namespace Str
+//                    // Ind, or FFFFFFFF
+//                    int attrNameSi = LEW(xml, off + 1 * 4); // AttrName String
+//                    // Index
+//                    int attrValueSi = LEW(xml, off + 2 * 4); // AttrValue Str
+//                    // Ind, or
+//                    // FFFFFFFF
+//                    int attrFlags = LEW(xml, off + 3 * 4);
+//                    int attrResId = LEW(xml, off + 4 * 4); // AttrValue
+//                    // ResourceId or dup
+//                    // AttrValue StrInd
+//                    off += 5 * 4; // Skip over the 5 words of an attribute
+//
+//                    String attrName = compXmlString(xml, sitOff, stOff,
+//                            attrNameSi);
+//                    String attrValue = attrValueSi != -1 ? compXmlString(xml,
+//                            sitOff, stOff, attrValueSi) : "resourceID 0x"
+//                            + Integer.toHexString(attrResId);
+//                    sb.append(" " + attrName + "=\"" + attrValue + "\"");
+//                    // tr.add(attrName, attrValue);
+//                }
+//                finalXML.append("<" + name + sb + ">");
+//                prtIndent(indent, "<" + name + sb + ">");
+//                indent++;
+//
+//            } else if (tag0 == endTag) { // XML END TAG
+//                indent--;
+//                off += 6 * 4; // Skip over 6 words of endTag data
+//                String name = compXmlString(xml, sitOff, stOff, nameSi);
+//                finalXML.append("</" + name + ">");
+//                prtIndent(indent, "</" + name + "> (line " + startTagLineNo
+//                        + "-" + lineNo + ")");
+//                // tr.parent(); // Step back up the NobTree
+//
+//            } else if (tag0 == endDocTag) { // END OF XML DOC TAG
+//                break;
+//
+//            } else {
+//                prt("  Unrecognized tag code '" + Integer.toHexString(tag0)
+//                        + "' at offset " + off);
+//                break;
+//            }
+//        } // end of while loop scanning tags and attributes of XML tree
+//        //prt("    end at offset " + off);
+//        return finalXML.toString();
+//    } // end of decompressXML
+//
+//    public static String compXmlString(byte[] xml, int sitOff, int stOff, int strInd) {
+//        if (strInd < 0)
+//            return null;
+//        int strOff = stOff + LEW(xml, sitOff + strInd * 4);
+//        return compXmlStringAt(xml, strOff);
+//    }
+//
+//    public static String spaces = "                                             ";
+//
+//    public static void prtIndent(int indent, String str) {
+//        prt(spaces.substring(0, Math.min(indent * 2, spaces.length())) + str);
+//    }
+//
+//    // compXmlStringAt -- Return the string stored in StringTable format at
+//    // offset strOff. This offset points to the 16 bit string length, which
+//    // is followed by that number of 16 bit (Unicode) chars.
+//    public static String compXmlStringAt(byte[] arr, int strOff) {
+//        int strLen = arr[strOff + 1] << 8 & 0xff00 | arr[strOff] & 0xff;
+//        byte[] chars = new byte[strLen];
+//        for (int ii = 0; ii < strLen; ii++) {
+//            chars[ii] = arr[strOff + 2 + ii * 2];
+//        }
+//        return new String(chars); // Hack, just use 8 byte chars
+//    } // end of compXmlStringAt
+//
+//    // LEW -- Return value of a Little Endian 32 bit word from the byte array
+//    // at offset off.
+//    public static int LEW(byte[] arr, int off) {
+//        return ((arr[off + 3] << 24) & 0xff000000) |
+//                ((arr[off + 2] << 16) & 0xff0000) |
+//                ((arr[off + 1] << 8) & 0xff00) |
+//                (arr[off] & 0xFF);
+//    } // end of LEW
+//
+//    public static Document loadXMLFromString(String xml) throws Exception {
+//        DocumentBuilderFactory docBuilderFactory = DocumentBuilderFactory.newInstance();
+//        DocumentBuilder docBuilder = docBuilderFactory.newDocumentBuilder();
+//        return docBuilder.parse(new InputSource(new StringReader(xml)));
+//    }
+//
+//    public static String extract_dex_and_read_className(String filePath, String dexPath) throws IOException {
+//        ZipFile zip = null;
+//
+//        zip = new ZipFile(filePath);
+//        ZipEntry androidManifest = zip.getEntry("AndroidManifest.xml");
+//        ZipEntry classesDex = zip.getEntry("classes.dex");
+//
+//        // write dex file
+//        InputStream dexStream = zip.getInputStream(classesDex);
+//        try (OutputStream os = Files.newOutputStream(Paths.get(dexPath))) {
+//            byte[] buffer = new byte[1024];
+//            int len;
+//            while ((len = dexStream.read(buffer)) > 0) {
+//                os.write(buffer, 0, len);
+//            }
+//        }
+//
+//        // read xml file
+//        InputStream is = zip.getInputStream(androidManifest);
+//        byte[] buf = new byte[1024000]; // 100 kb
+//        is.read(buf);
+//        is.close();
+//        zip.close();
+//
+//        String xml = APKExtractor.decompressXML(buf);
+//        try {
+//            Document xmlDoc = loadXMLFromString(xml);
+//            String pkg = xmlDoc.getDocumentElement().getAttribute("package");
+//            NodeList nodes = xmlDoc.getElementsByTagName("meta-data");
+//            for (int i = 0; i < nodes.getLength(); i++) {
+//                NamedNodeMap attributes = nodes.item(i).getAttributes();
+//                System.out.println(attributes.getNamedItem("name").getNodeValue());
+//                if (attributes.getNamedItem("name").getNodeValue().equals("tachiyomi.extension.class"))
+//                    return pkg + attributes.getNamedItem("value").getNodeValue();
+//            }
+//        } catch (Exception e) {
+//            e.printStackTrace();
+//        }
+//        return "";
+//    }
+// }

server/src/main/kotlin/ir/armor/tachidesk/impl/util/File.kt

@@ -0,0 +1,85 @@
+package ir.armor.tachidesk.impl
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import okhttp3.Response
+import okio.BufferedSource
+import okio.buffer
+import okio.sink
+import java.io.BufferedInputStream
+import java.io.File
+import java.io.FileInputStream
+import java.io.InputStream
+import java.io.OutputStream
+import java.nio.file.Files
+import java.nio.file.Paths
+
+// fun writeStream(fileStream: InputStream, path: String) {
+//    Files.newOutputStream(Paths.get(path)).use { os ->
+//        val buffer = ByteArray(128 * 1024)
+//        var len: Int
+//        while (fileStream.read(buffer).also { len = it } > 0) {
+//            os.write(buffer, 0, len)
+//        }
+//    }
+// }
+
+fun pathToInputStream(path: String): InputStream {
+    return BufferedInputStream(FileInputStream(path))
+}
+
+fun findFileNameStartingWith(directoryPath: String, fileName: String): String? {
+    File(directoryPath).listFiles().forEach { file ->
+        if (file.name.startsWith(fileName))
+            return "$directoryPath/${file.name}"
+    }
+    return null
+}
+
+/**
+ * Saves the given source to an output stream and closes both resources.
+ *
+ * @param stream the stream where the source is copied.
+ */
+private fun BufferedSource.saveTo(stream: OutputStream) {
+    use { input ->
+        stream.sink().buffer().use {
+            it.writeAll(input)
+            it.flush()
+        }
+    }
+}
+
+fun getCachedImageResponse(saveDir: String, fileName: String, fetcher: () -> Response): Pair<InputStream, String> {
+    val cachedFile = findFileNameStartingWith(saveDir, fileName)
+    val filePath = "$saveDir/$fileName"
+    if (cachedFile != null) {
+        val fileType = cachedFile.substringAfter(filePath)
+        return Pair(
+            pathToInputStream(cachedFile),
+            "image/$fileType"
+        )
+    }
+
+    val response = fetcher()
+
+    if (response.code == 200) {
+        val contentType = response.headers["content-type"]!!
+        val fullPath = filePath + "." + contentType.substringAfter("image/")
+
+        Files.newOutputStream(Paths.get(fullPath)).use { os ->
+            response.body!!.source().saveTo(os)
+        }
+        return Pair(
+            pathToInputStream(fullPath),
+            contentType
+        )
+    } else {
+        throw Exception("request error! ${response.code}")
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/server/JavalinSetup.kt

@@ -0,0 +1,260 @@
+package ir.armor.tachidesk.server
+
+import io.javalin.Javalin
+import ir.armor.tachidesk.Main
+import ir.armor.tachidesk.impl.addMangaToCategory
+import ir.armor.tachidesk.impl.addMangaToLibrary
+import ir.armor.tachidesk.impl.createCategory
+import ir.armor.tachidesk.impl.getCategoryList
+import ir.armor.tachidesk.impl.getCategoryMangaList
+import ir.armor.tachidesk.impl.getChapter
+import ir.armor.tachidesk.impl.getChapterList
+import ir.armor.tachidesk.impl.getExtensionIcon
+import ir.armor.tachidesk.impl.getExtensionList
+import ir.armor.tachidesk.impl.getLibraryMangas
+import ir.armor.tachidesk.impl.getManga
+import ir.armor.tachidesk.impl.getMangaCategories
+import ir.armor.tachidesk.impl.getMangaList
+import ir.armor.tachidesk.impl.getPageImage
+import ir.armor.tachidesk.impl.getSource
+import ir.armor.tachidesk.impl.getSourceList
+import ir.armor.tachidesk.impl.getThumbnail
+import ir.armor.tachidesk.impl.installAPK
+import ir.armor.tachidesk.impl.removeCategory
+import ir.armor.tachidesk.impl.removeExtension
+import ir.armor.tachidesk.impl.removeMangaFromCategory
+import ir.armor.tachidesk.impl.removeMangaFromLibrary
+import ir.armor.tachidesk.impl.reorderCategory
+import ir.armor.tachidesk.impl.sourceFilters
+import ir.armor.tachidesk.impl.sourceGlobalSearch
+import ir.armor.tachidesk.impl.sourceSearch
+import ir.armor.tachidesk.impl.updateCategory
+import ir.armor.tachidesk.server.util.openInBrowser
+import mu.KotlinLogging
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+private val logger = KotlinLogging.logger {}
+
+fun javalinSetup() {
+    var hasWebUiBundled = false
+
+    val app = Javalin.create { config ->
+        try {
+            Main::class.java.getResource("/react/index.html")
+            hasWebUiBundled = true
+            config.addStaticFiles("/react")
+            config.addSinglePageRoot("/", "/react/index.html")
+        } catch (e: RuntimeException) {
+            logger.warn("react build files are missing.")
+            hasWebUiBundled = false
+        }
+        config.enableCorsForAllOrigins()
+    }.start(serverConfig.ip, serverConfig.port)
+    if (hasWebUiBundled && serverConfig.initialOpenInBrowserEnabled) {
+        openInBrowser()
+    }
+
+    app.exception(NullPointerException::class.java) { e, ctx ->
+        logger.error("NullPointerException while handling the request", e)
+        ctx.status(404)
+    }
+
+    app.get("/api/v1/extension/list") { ctx ->
+        ctx.json(getExtensionList())
+    }
+
+    app.get("/api/v1/extension/install/:apkName") { ctx ->
+        val apkName = ctx.pathParam("apkName")
+
+        ctx.status(
+            installAPK(apkName)
+        )
+    }
+
+    app.get("/api/v1/extension/uninstall/:apkName") { ctx ->
+        val apkName = ctx.pathParam("apkName")
+
+        removeExtension(apkName)
+        ctx.status(200)
+    }
+
+    // icon for extension named `apkName`
+    app.get("/api/v1/extension/icon/:apkName") { ctx ->
+        val apkName = ctx.pathParam("apkName")
+        val result = getExtensionIcon(apkName)
+
+        ctx.result(result.first)
+        ctx.header("content-type", result.second)
+    }
+
+    // list of sources
+    app.get("/api/v1/source/list") { ctx ->
+        ctx.json(getSourceList())
+    }
+
+    // fetch source with id `sourceId`
+    app.get("/api/v1/source/:sourceId") { ctx ->
+        val sourceId = ctx.pathParam("sourceId").toLong()
+        ctx.json(getSource(sourceId))
+    }
+
+    // popular mangas from source with id `sourceId`
+    app.get("/api/v1/source/:sourceId/popular/:pageNum") { ctx ->
+        val sourceId = ctx.pathParam("sourceId").toLong()
+        val pageNum = ctx.pathParam("pageNum").toInt()
+        ctx.json(getMangaList(sourceId, pageNum, popular = true))
+    }
+
+    // latest mangas from source with id `sourceId`
+    app.get("/api/v1/source/:sourceId/latest/:pageNum") { ctx ->
+        val sourceId = ctx.pathParam("sourceId").toLong()
+        val pageNum = ctx.pathParam("pageNum").toInt()
+        ctx.json(getMangaList(sourceId, pageNum, popular = false))
+    }
+
+    // get manga info
+    app.get("/api/v1/manga/:mangaId/") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        ctx.json(getManga(mangaId))
+    }
+
+    // manga thumbnail
+    app.get("api/v1/manga/:mangaId/thumbnail") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        val result = getThumbnail(mangaId)
+
+        ctx.result(result.first)
+        ctx.header("content-type", result.second)
+    }
+
+    // adds the manga to library
+    app.get("api/v1/manga/:mangaId/library") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        addMangaToLibrary(mangaId)
+        ctx.status(200)
+    }
+
+    // removes the manga from the library
+    app.delete("api/v1/manga/:mangaId/library") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        removeMangaFromLibrary(mangaId)
+        ctx.status(200)
+    }
+
+    // list manga's categories
+    app.get("api/v1/manga/:mangaId/category/") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        ctx.json(getMangaCategories(mangaId))
+    }
+
+    // adds the manga to category
+    app.get("api/v1/manga/:mangaId/category/:categoryId") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        addMangaToCategory(mangaId, categoryId)
+        ctx.status(200)
+    }
+
+    // removes the manga from the category
+    app.delete("api/v1/manga/:mangaId/category/:categoryId") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        removeMangaFromCategory(mangaId, categoryId)
+        ctx.status(200)
+    }
+
+    app.get("/api/v1/manga/:mangaId/chapters") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        ctx.json(getChapterList(mangaId))
+    }
+
+    app.get("/api/v1/manga/:mangaId/chapter/:chapterIndex") { ctx ->
+        val chapterIndex = ctx.pathParam("chapterIndex").toInt()
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        ctx.json(getChapter(chapterIndex, mangaId))
+    }
+
+    app.get("/api/v1/manga/:mangaId/chapter/:chapterIndex/page/:index") { ctx ->
+        val mangaId = ctx.pathParam("mangaId").toInt()
+        val chapterIndex = ctx.pathParam("chapterIndex").toInt()
+        val index = ctx.pathParam("index").toInt()
+        val result = getPageImage(mangaId, chapterIndex, index)
+
+        ctx.result(result.first)
+        ctx.header("content-type", result.second)
+    }
+
+    // global search
+    app.get("/api/v1/search/:searchTerm") { ctx ->
+        val searchTerm = ctx.pathParam("searchTerm")
+        ctx.json(sourceGlobalSearch(searchTerm))
+    }
+
+    // single source search
+    app.get("/api/v1/source/:sourceId/search/:searchTerm/:pageNum") { ctx ->
+        val sourceId = ctx.pathParam("sourceId").toLong()
+        val searchTerm = ctx.pathParam("searchTerm")
+        val pageNum = ctx.pathParam("pageNum").toInt()
+        ctx.json(sourceSearch(sourceId, searchTerm, pageNum))
+    }
+
+    // source filter list
+    app.get("/api/v1/source/:sourceId/filters/") { ctx ->
+        val sourceId = ctx.pathParam("sourceId").toLong()
+        ctx.json(sourceFilters(sourceId))
+    }
+
+    // lists mangas that have no category assigned
+    app.get("/api/v1/library/") { ctx ->
+        ctx.json(getLibraryMangas())
+    }
+
+    // category list
+    app.get("/api/v1/category/") { ctx ->
+        ctx.json(getCategoryList())
+    }
+
+    // category create
+    app.post("/api/v1/category/") { ctx ->
+        val name = ctx.formParam("name")!!
+        createCategory(name)
+        ctx.status(200)
+    }
+
+    // category modification
+    app.patch("/api/v1/category/:categoryId") { ctx ->
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        val name = ctx.formParam("name")
+        val isLanding = if (ctx.formParam("isLanding") != null) ctx.formParam("isLanding")?.toBoolean() else null
+        updateCategory(categoryId, name, isLanding)
+        ctx.status(200)
+    }
+
+    // category re-ordering
+    app.patch("/api/v1/category/:categoryId/reorder") { ctx ->
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        val from = ctx.formParam("from")!!.toInt()
+        val to = ctx.formParam("to")!!.toInt()
+        reorderCategory(categoryId, from, to)
+        ctx.status(200)
+    }
+
+    // category delete
+    app.delete("/api/v1/category/:categoryId") { ctx ->
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        removeCategory(categoryId)
+        ctx.status(200)
+    }
+
+    // returns the manga list associated with a category
+    app.get("/api/v1/category/:categoryId") { ctx ->
+        val categoryId = ctx.pathParam("categoryId").toInt()
+        ctx.json(getCategoryMangaList(categoryId))
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/server/ServerConfig.kt

@@ -0,0 +1,31 @@
+package ir.armor.tachidesk.server
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import com.typesafe.config.Config
+import io.github.config4k.getValue
+import xyz.nulldev.ts.config.ConfigModule
+
+class ServerConfig(config: Config) : ConfigModule(config) {
+    val ip: String by config
+    val port: Int by config
+
+    // proxy
+    val socksProxy: Boolean by config
+    val socksProxyHost: String by config
+    val socksProxyPort: String by config
+
+    // misc
+    val debugLogsEnabled: Boolean by config
+    val systemTrayEnabled: Boolean by config
+    val initialOpenInBrowserEnabled: Boolean by config
+
+    companion object {
+        fun register(config: Config) = ServerConfig(config.getConfig("server"))
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/server/ServerSetup.kt

@@ -0,0 +1,101 @@
+package ir.armor.tachidesk.server
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import ch.qos.logback.classic.Level
+import eu.kanade.tachiyomi.App
+import ir.armor.tachidesk.Main
+import ir.armor.tachidesk.database.makeDataBaseTables
+import ir.armor.tachidesk.server.util.systemTray
+import mu.KotlinLogging
+import net.harawata.appdirs.AppDirsFactory
+import org.kodein.di.DI
+import org.kodein.di.conf.global
+import xyz.nulldev.androidcompat.AndroidCompat
+import xyz.nulldev.androidcompat.AndroidCompatInitializer
+import xyz.nulldev.ts.config.ConfigKodeinModule
+import xyz.nulldev.ts.config.GlobalConfigManager
+import java.io.File
+
+private val logger = KotlinLogging.logger {}
+
+object applicationDirs {
+    val dataRoot = AppDirsFactory.getInstance().getUserDataDir("Tachidesk", null, null)!!
+    val extensionsRoot = "$dataRoot/extensions"
+    val thumbnailsRoot = "$dataRoot/thumbnails"
+    val mangaRoot = "$dataRoot/manga"
+}
+
+val serverConfig: ServerConfig by lazy { GlobalConfigManager.module() }
+
+val systemTray by lazy { systemTray() }
+
+val androidCompat by lazy { AndroidCompat() }
+
+fun applicationSetup() {
+    // register server config
+    GlobalConfigManager.registerModule(
+        ServerConfig.register(GlobalConfigManager.config)
+    )
+
+    // set application wide logging level
+    if (serverConfig.debugLogsEnabled) {
+        (mu.KotlinLogging.logger(org.slf4j.Logger.ROOT_LOGGER_NAME).underlyingLogger as ch.qos.logback.classic.Logger).level = Level.DEBUG
+    }
+
+    // make dirs we need
+    listOf(
+        applicationDirs.dataRoot,
+        applicationDirs.extensionsRoot,
+        "${applicationDirs.extensionsRoot}/icon",
+        applicationDirs.thumbnailsRoot
+    ).forEach {
+        File(it).mkdirs()
+    }
+
+    // create conf file if doesn't exist
+    try {
+        val dataConfFile = File("${applicationDirs.dataRoot}/server.conf")
+        if (!dataConfFile.exists()) {
+            Main::class.java.getResourceAsStream("/server-reference.conf").use { input ->
+                dataConfFile.outputStream().use { output ->
+                    input.copyTo(output)
+                }
+            }
+        }
+    } catch (e: Exception) {
+        logger.error("Exception while creating initial server.conf:\n", e)
+    }
+
+    makeDataBaseTables()
+
+    // create system tray
+    if (serverConfig.systemTrayEnabled)
+        try {
+            systemTray
+        } catch (e: Exception) {
+            e.printStackTrace()
+        }
+
+    // Load config API
+    DI.global.addImport(ConfigKodeinModule().create())
+    // Load Android compatibility dependencies
+    AndroidCompatInitializer().init()
+    // start app
+    androidCompat.startApp(App())
+
+    // Disable jetty's logging
+    System.setProperty("org.eclipse.jetty.util.log.announce", "false")
+    System.setProperty("org.eclipse.jetty.util.log.class", "org.eclipse.jetty.util.log.StdErrLog")
+    System.setProperty("org.eclipse.jetty.LEVEL", "OFF")
+
+    // socks proxy settings
+    System.getProperties()["proxySet"] = serverConfig.socksProxy.toString()
+    System.getProperties()["socksProxyHost"] = serverConfig.socksProxyHost
+    System.getProperties()["socksProxyPort"] = serverConfig.socksProxyPort
+}

server/src/main/kotlin/ir/armor/tachidesk/server/util/SystemTray.kt

@@ -0,0 +1,71 @@
+package ir.armor.tachidesk.server.util
+
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ * 
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import dorkbox.systemTray.MenuItem
+import dorkbox.systemTray.SystemTray
+import dorkbox.systemTray.SystemTray.TrayType
+import dorkbox.util.CacheUtil
+import dorkbox.util.Desktop
+import ir.armor.tachidesk.Main
+import ir.armor.tachidesk.server.serverConfig
+import java.awt.event.ActionListener
+import java.io.IOException
+
+fun openInBrowser() {
+    try {
+        Desktop.browseURL("http://127.0.0.1:4567")
+    } catch (e1: IOException) {
+        e1.printStackTrace()
+    }
+}
+
+fun systemTray(): SystemTray? {
+    try {
+        // ref: https://github.com/dorkbox/SystemTray/blob/master/test/dorkbox/TestTray.java
+        SystemTray.DEBUG = serverConfig.debugLogsEnabled
+        if (System.getProperty("os.name").startsWith("Windows"))
+            SystemTray.FORCE_TRAY_TYPE = TrayType.Swing
+
+        CacheUtil.clear()
+
+        val systemTray = SystemTray.get() ?: return null
+        val mainMenu = systemTray.menu
+
+        mainMenu.add(
+            MenuItem(
+                "Open Tachidesk",
+                ActionListener {
+                    try {
+                        Desktop.browseURL("http://127.0.0.1:4567")
+                    } catch (e: IOException) {
+                        e.printStackTrace()
+                    }
+                }
+            )
+        )
+
+        val icon = Main::class.java.getResource("/icon/faviconlogo.png")
+
+//    systemTray.setTooltip("Tachidesk")
+        systemTray.setImage(icon)
+//    systemTray.status = "No Mail"
+
+        systemTray.getMenu().add(
+            MenuItem("Quit") {
+                systemTray.shutdown()
+                System.exit(0)
+            }
+        )
+
+        return systemTray
+    } catch (e: Exception) {
+        e.printStackTrace()
+        return null
+    }
+}

server/src/main/kotlin/ir/armor/tachidesk/util/File.kt

@@ -1,52 +0,0 @@
-package ir.armor.tachidesk.util
-
-/* This Source Code Form is subject to the terms of the Mozilla Public
- * License, v. 2.0. If a copy of the MPL was not distributed with this
- * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
-
-import okio.BufferedSource
-import okio.buffer
-import okio.sink
-import java.io.BufferedInputStream
-import java.io.File
-import java.io.FileInputStream
-import java.io.InputStream
-import java.io.OutputStream
-import java.nio.file.Files
-import java.nio.file.Paths
-
-fun writeStream(fileStream: InputStream, path: String) {
-    Files.newOutputStream(Paths.get(path)).use { os ->
-        val buffer = ByteArray(128 * 1024)
-        var len: Int
-        while (fileStream.read(buffer).also { len = it } > 0) {
-            os.write(buffer, 0, len)
-        }
-    }
-}
-
-fun pathToInputStream(path: String): InputStream {
-    return BufferedInputStream(FileInputStream(path))
-}
-
-fun findFileNameStartingWith(directoryPath: String, fileName: String): String? {
-    File(directoryPath).listFiles().forEach { file ->
-        if (file.name.startsWith(fileName))
-            return "$directoryPath/${file.name}"
-    }
-    return null
-}
-
-/**
- * Saves the given source to an output stream and closes both resources.
- *
- * @param stream the stream where the source is copied.
- */
-fun BufferedSource.saveTo(stream: OutputStream) {
-    use { input ->
-        stream.sink().buffer().use {
-            it.writeAll(input)
-            it.flush()
-        }
-    }
-}

server/src/main/kotlin/ir/armor/tachidesk/util/Util.kt

@@ -1,18 +0,0 @@
-package ir.armor.tachidesk.util
-
-/* This Source Code Form is subject to the terms of the Mozilla Public
- * License, v. 2.0. If a copy of the MPL was not distributed with this
- * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
-
-import ir.armor.tachidesk.Config
-import ir.armor.tachidesk.database.makeDataBaseTables
-import java.io.File
-
-fun applicationSetup() {
-    // make dirs we need
-    File(Config.dataRoot).mkdirs()
-    File(Config.extensionsRoot).mkdirs()
-    File(Config.thumbnailsRoot).mkdirs()
-
-    makeDataBaseTables()
-}

server/src/main/resources/logback.xml

@@ -0,0 +1,16 @@
+<configuration>
+
+    <appender name="STDOUT" class="ch.qos.logback.core.ConsoleAppender">
+        <!-- encoders are assigned the type
+             ch.qos.logback.classic.encoder.PatternLayoutEncoder by default -->
+        <encoder>
+            <pattern>%d{HH:mm:ss.SSS} [%thread] %highlight(%-5level) %logger - %msg%n</pattern>
+        </encoder>
+    </appender>
+
+    <logger name="Exposed" level="ERROR"/>
+
+    <root level="INFO">
+        <appender-ref ref="STDOUT" />
+    </root>
+</configuration>

server/src/main/resources/server-reference.conf

@@ -0,0 +1,13 @@
+# Server ip and port bindings
+server.ip = "0.0.0.0"
+server.port = 4567
+
+# Socks5 proxy
+server.socksProxy = false
+server.socksProxyHost = ""
+server.socksProxyPort = ""
+
+# misc
+server.debugLogsEnabled = false
+server.systemTrayEnabled = true
+server.initialOpenInBrowserEnabled = true

server/src/test/kotlin/ir/armor/tachidesk/AppTest.kt

@@ -1,13 +0,0 @@
-/*
- * This Kotlin source file was generated by the Gradle 'init' task.
- */
-package ir.armor.tachidesk
-
-import kotlin.test.Test
-import kotlin.test.assertTrue
-
-class AppTest {
-    @Test fun testAppHasAGreeting() {
-        assertTrue(true)
-    }
-}

webUI/node_modules/.yarn-integrity

@@ -1,10 +0,0 @@
-{
-  "systemParams": "linux-x64-88",
-  "modulesFolders": [],
-  "flags": [],
-  "linkedModules": [],
-  "topLevelPatterns": [],
-  "lockfileEntries": {},
-  "files": [],
-  "artifacts": {}
-}

webUI/react/.eslintrc.js

@@ -13,5 +13,7 @@ module.exports = {
 
         // Indent props with 4 spaces
         'react/jsx-indent-props': ['error', 4],
+
+        'no-plusplus': ['error', { 'allowForLoopAfterthoughts': true }]
     },
 };

webUI/react/.gitignore

@@ -1,3 +1,4 @@
 node_modules/
 .eslintcache
 .vscode
+.env

webUI/react/package.json

@@ -8,9 +8,13 @@
     "@testing-library/jest-dom": "^5.11.4",
     "@testing-library/react": "^11.1.0",
     "@testing-library/user-event": "^12.1.10",
+    "@types/react-lazyload": "^3.1.0",
+    "axios": "^0.21.1",
     "fontsource-roboto": "^4.0.0",
     "react": "^17.0.1",
+    "react-beautiful-dnd": "^13.0.0",
     "react-dom": "^17.0.1",
+    "react-lazyload": "^3.2.0",
     "react-router-dom": "^5.2.0",
     "react-scripts": "4.0.1",
     "web-vitals": "^0.2.4"

webUI/react/public/index.html

@@ -7,9 +7,9 @@
     <meta name="theme-color" content="#000000"/>
     <meta
             name="description"
-            content="Web site created using create-react-app"
+            content="A manga reader that runs tachiyomi's extensions"
     />
-    <link rel="apple-touch-icon" href="%PUBLIC_URL%/logo192.png"/>
+    <link rel="apple-touch-icon" href="%PUBLIC_URL%/favicon.png"/>
     <!--
       manifest.json provides metadata used when your web app is installed on a
       user's mobile device or desktop. See https://developers.google.com/web/fundamentals/web-app-manifest/
@@ -24,7 +24,7 @@
       work correctly both with client-side routing and a non-root public URL.
       Learn how to configure a non-root public URL by running `npm run build`.
     -->
-    <title>React App</title>
+    <title>Tachidesk</title>
 </head>
 <body>
 <noscript>You need to enable JavaScript to run this app.</noscript>

webUI/react/public/manifest.json

@@ -1,6 +1,6 @@
 {
-  "short_name": "React App",
+  "short_name": "Tachidesk",
-  "name": "Create React App Sample",
+  "name": "Tachidesk",
   "icons": [
     {
       "src": "favicon.ico",
@@ -8,18 +8,24 @@
       "type": "image/x-icon"
     },
     {
-      "src": "logo192.png",
+      "src": "favicon.png",
       "type": "image/png",
       "sizes": "192x192"
     },
     {
-      "src": "logo512.png",
+      "src": "favicon.png",
       "type": "image/png",
       "sizes": "512x512"
+    },
+    {
+      "src": "favicon.png",
+      "type": "image/png",
+      "sizes": "512x512",
+      "purpose": "maskable"
     }
   ],
   "start_url": ".",
   "display": "standalone",
-  "theme_color": "#000000",
+  "theme_color": "#ff2323",
-  "background_color": "#ffffff"
+  "background_color": "#ff2323"
 }

webUI/react/src/App.tsx

@@ -1,30 +1,42 @@
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
 import React, { useState } from 'react';
 import {
-    BrowserRouter as Router, Route, Switch,
+    BrowserRouter as Router, Redirect, Route, Switch,
 } from 'react-router-dom';
 import { Container } from '@material-ui/core';
 import CssBaseline from '@material-ui/core/CssBaseline';
 import { createMuiTheme, ThemeProvider } from '@material-ui/core/styles';
 
 import NavBar from './components/NavBar';
-import Home from './screens/Home';
 import Sources from './screens/Sources';
 import Extensions from './screens/Extensions';
-import MangaList from './screens/MangaList';
+import SourceMangas from './screens/SourceMangas';
 import Manga from './screens/Manga';
 import Reader from './screens/Reader';
 import Search from './screens/SearchSingle';
-import NavBarTitle from './context/NavbarTitle';
+import NavbarContext from './context/NavbarContext';
 import DarkTheme from './context/DarkTheme';
+import Library from './screens/Library';
+import Settings from './screens/Settings';
+import Categories from './screens/settings/Categories';
+import useLocalStorage from './util/useLocalStorage';
 
 export default function App() {
     const [title, setTitle] = useState<string>('Tachidesk');
-    const [darkTheme, setDarkTheme] = useState<boolean>(true);
+    const [action, setAction] = useState<any>(<div />);
-    const navTitleContext = { title, setTitle };
+    const [override, setOverride] = useState<INavbarOverride>({ status: false, value: <div /> });
+
+    const [darkTheme, setDarkTheme] = useLocalStorage<boolean>('darkTheme', true);
+
+    const navBarContext = {
+        title, setTitle, action, setAction, override, setOverride,
+    };
     const darkThemeContext = { darkTheme, setDarkTheme };
 
     const theme = React.useMemo(
@@ -53,14 +65,16 @@ export default function App() {
 
     return (
         <Router>
-
             <ThemeProvider theme={theme}>
-                <NavBarTitle.Provider value={navTitleContext}>
+                <NavbarContext.Provider value={navBarContext}>
                     <CssBaseline />
-                    <DarkTheme.Provider value={darkThemeContext}>
+                    <NavBar />
-                        <NavBar />
+                    <Container
-                    </DarkTheme.Provider>
+                        id="appMainContainer"
-                    <Container maxWidth={false} disableGutters>
+                        maxWidth={false}
+                        disableGutters
+                        style={{ paddingTop: '64px' }}
+                    >
                         <Switch>
                             <Route path="/sources/:sourceId/search/">
                                 <Search />
@@ -69,26 +83,46 @@ export default function App() {
                                 <Extensions />
                             </Route>
                             <Route path="/sources/:sourceId/popular/">
-                                <MangaList popular />
+                                <SourceMangas popular />
                             </Route>
                             <Route path="/sources/:sourceId/latest/">
-                                <MangaList popular={false} />
+                                <SourceMangas popular={false} />
                             </Route>
                             <Route path="/sources">
                                 <Sources />
                             </Route>
-                            <Route path="/manga/:mangaId/chapter/:chapterId">
+                            <Route path="/manga/:mangaId/chapter/:chapterNum">
-                                <Reader />
+                                <></>
                             </Route>
                             <Route path="/manga/:id">
                                 <Manga />
                             </Route>
-                            <Route path="/">
+                            <Route path="/library">
-                                <Home />
+                                <Library />
                             </Route>
+                            <Route path="/settings/categories">
+                                <Categories />
+                            </Route>
+                            <Route path="/settings">
+                                <DarkTheme.Provider value={darkThemeContext}>
+                                    <Settings />
+                                </DarkTheme.Provider>
+                            </Route>
+                            <Route
+                                exact
+                                path="/"
+                                render={() => (
+                                    <Redirect to="/library" />
+                                )}
+                            />
                         </Switch>
                     </Container>
-                </NavBarTitle.Provider>
+                    <Switch>
+                        <Route path="/manga/:mangaId/chapter/:chapterIndex">
+                            <Reader />
+                        </Route>
+                    </Switch>
+                </NavbarContext.Provider>
             </ThemeProvider>
         </Router>
     );

webUI/react/src/components/CategorySelect.tsx

@@ -0,0 +1,124 @@
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
+ * License, v. 2.0. If a copy of the MPL was not distributed with this
+ * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
+
+import React, { useEffect, useState } from 'react';
+import { makeStyles, createStyles } from '@material-ui/core/styles';
+import Button from '@material-ui/core/Button';
+import DialogTitle from '@material-ui/core/DialogTitle';
+import DialogContent from '@material-ui/core/DialogContent';
+import DialogActions from '@material-ui/core/DialogActions';
+import Dialog from '@material-ui/core/Dialog';
+import Checkbox from '@material-ui/core/Checkbox';
+import FormControlLabel from '@material-ui/core/FormControlLabel';
+import FormGroup from '@material-ui/core/FormGroup';
+import client from '../util/client';
+
+const useStyles = makeStyles(() => createStyles({
+    paper: {
+        maxHeight: 435,
+        width: '80%',
+    },
+}));
+
+interface IProps {
+    open: boolean
+    setOpen: (value: boolean) => void
+    mangaId: number
+}
+
+interface ICategoryInfo {
+    category: ICategory
+    selected: boolean
+}
+
+export default function CategorySelect(props: IProps) {
+    const classes = useStyles();
+    const { open, setOpen, mangaId } = props;
+    const [categoryInfos, setCategoryInfos] = useState<ICategoryInfo[]>([]);
+
+    const [updateTriggerHolder, setUpdateTriggerHolder] = useState(0); // just a hack
+    const triggerUpdate = () => setUpdateTriggerHolder(updateTriggerHolder + 1); // just a hack
+
+    useEffect(() => {
+        let tmpCategoryInfos: ICategoryInfo[] = [];
+        client.get('/api/v1/category/')
+            .then((response) => response.data)
+            .then((data: ICategory[]) => {
+                tmpCategoryInfos = data.map((category) => ({ category, selected: false }));
+            })
+            .then(() => {
+                client.get(`/api/v1/manga/${mangaId}/category/`)
+                    .then((response) => response.data)
+                    .then((data: ICategory[]) => {
+                        data.forEach((category) => {
+                            tmpCategoryInfos[category.order - 1].selected = true;
+                        });
+                        setCategoryInfos(tmpCategoryInfos);
+                    });
+            });
+    }, [updateTriggerHolder, open]);
+
+    const handleCancel = () => {
+        setOpen(false);
+    };
+
+    const handleOk = () => {
+        setOpen(false);
+    };
+
+    // eslint-disable-next-line @typescript-eslint/no-unused-vars
+    const handleChange = (event: React.ChangeEvent<HTMLInputElement>, categoryId: number) => {
+        const { checked } = event.target as HTMLInputElement;
+
+        const method = checked ? client.get : client.delete;
+        method(`/api/v1/manga/${mangaId}/category/${categoryId}`)
+            .then(() => triggerUpdate());
+    };
+
+    return (
+        <Dialog
+            classes={classes}
+            maxWidth="xs"
+            open={open}
+        >
+            <DialogTitle>Set categories</DialogTitle>
+            <DialogContent dividers>
+                <FormGroup>
+                    {categoryInfos.length === 0
+                        && (
+                            <span>
+                                No categories found!
+                                <br />
+                                You should make some from settings.
+                            </span>
+                        )}
+                    {categoryInfos.map((categoryInfo) => (
+                        <FormControlLabel
+                            control={(
+                                <Checkbox
+                                    checked={categoryInfo.selected}
+                                    onChange={(e) => handleChange(e, categoryInfo.category.id)}
+                                    color="default"
+                                />
+                            )}
+                            label={categoryInfo.category.name}
+                        />
+                    ))}
+                </FormGroup>
+
+            </DialogContent>
+            <DialogActions>
+                <Button autoFocus onClick={handleCancel} color="primary">
+                    Cancel
+                </Button>
+                <Button onClick={handleOk} color="primary">
+                    Ok
+                </Button>
+            </DialogActions>
+        </Dialog>
+    );
+}

webUI/react/src/components/ChapterCard.tsx

@@ -1,4 +1,8 @@
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/* eslint-disable @typescript-eslint/no-unused-vars */
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -8,6 +12,7 @@ import Card from '@material-ui/core/Card';
 import CardContent from '@material-ui/core/CardContent';
 import Button from '@material-ui/core/Button';
 import Typography from '@material-ui/core/Typography';
+import { Link, useHistory } from 'react-router-dom';
 
 const useStyles = makeStyles((theme) => ({
     root: {
@@ -41,6 +46,7 @@ interface IProps{
 
 export default function ChapterCard(props: IProps) {
     const classes = useStyles();
+    const history = useHistory();
     const { chapter } = props;
 
     const dateStr = chapter.date_upload && new Date(chapter.date_upload).toISOString().slice(0, 10);
@@ -63,9 +69,19 @@ export default function ChapterCard(props: IProps) {
                                 </Typography>
                             </div>
                         </div>
-                        <div style={{ display: 'flex' }}>
+                        <Link
-                            <Button variant="outlined" style={{ marginLeft: 20 }} onClick={() => { window.location.href = `/manga/${chapter.mangaId}/chapter/${chapter.id}`; }}>open</Button>
+                            to={`/manga/${chapter.mangaId}/chapter/${chapter.chapterIndex}`}
-                        </div>
+                            style={{ textDecoration: 'none' }}
+                        >
+                            <Button
+                                variant="outlined"
+                                style={{ marginLeft: 20 }}
+                            >
+                                open
+
+                            </Button>
+                        </Link>
+
                     </CardContent>
                 </Card>
             </li>

webUI/react/src/components/ExtensionCard.tsx

@@ -1,4 +1,7 @@
-/* This Source Code Form is subject to the terms of the Mozilla Public
+/*
+ * Copyright (C) Contributors to the Suwayomi project
+ *
+ * This Source Code Form is subject to the terms of the Mozilla Public
  * License, v. 2.0. If a copy of the MPL was not distributed with this
  * file, You can obtain one at https://mozilla.org/MPL/2.0/. */
 
@@ -9,6 +12,8 @@ import CardContent from '@material-ui/core/CardContent';
 import Button from '@material-ui/core/Button';
 import Avatar from '@material-ui/core/Avatar';
 import Typography from '@material-ui/core/Typography';
+import client from '../util/client';
+import useLocalStorage from '../util/useLocalStorage';
 
 const useStyles = makeStyles((theme) => ({
     root: {
@@ -38,31 +43,39 @@ const useStyles = makeStyles((theme) => ({
 
 interface IProps {
     extension: IExtension
+    notifyInstall: () => void
 }
 
 export default function ExtensionCard(props: IProps) {
     const {
         extension: {
-            name, lang, versionName, iconUrl, installed, apkName,
+            name, lang, versionName, installed, apkName, iconUrl,
         },
+        notifyInstall,
     } = props;
     const [installedState, setInstalledState] = useState<string>((installed ? 'uninstall' : 'install'));
 
+    const [serverAddress] = useLocalStorage<String>('serverBaseURL', '');
+
     const classes = useStyles();
     const langPress = lang === 'all' ? 'All' : lang.toUpperCase();
 
     function install() {
         setInstalledState('installing');
-        fetch(`http://127.0.0.1:4567/api/v1/extension/install/${apkName}`).then(() => {
+        client.get(`/api/v1/extension/install/${apkName}`)
-            setInstalledState('uninstall');
+            .then(() => {
-        });
+                setInstalledState('uninstall');
+                notifyInstall();
+            });
     }
 
     function uninstall() {
         setInstalledState('uninstalling');
-        fetch(`http://127.0.0.1:4567/api/v1/extension/uninstall/${apkName}`).then(() => {
+        client.get(`/api/v1/extension/uninstall/${apkName}`)
-            setInstalledState('install');
+            .then(() => {
-        });
+                // setInstalledState('install');
+                notifyInstall();
+            });
     }
 
     function handleButtonClick() {
@@ -81,7 +94,7 @@ export default function ExtensionCard(props: IProps) {
                         variant="rounded"
                         className={classes.icon}
                         alt={name}
-                        src={iconUrl}
+                        src={serverAddress + iconUrl}
                     />
                     <div style={{ display: 'flex', flexDirection: 'column' }}>
                         <Typography variant="h5" component="h2">